Pre_GI Gene

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Host: NC_011149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1110642 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11106421111058417type VI secretion system lysozyme-related proteinQuickGO ontologyBLASTP
111105511125271473type VI secretion protein EvpBfamilyQuickGO ontologyBLASTP
11128181113321504type VI secretion protein familyQuickGO ontologyBLASTP
11133781113554177hypothetical protein
11139501114468519hcpQuickGO ontologyBLASTP
111469111168322142type VI secretion system Vgr family proteinQuickGO ontologyBLASTP
111690111210674167protein RhsAQuickGO ontologyBLASTP
11211351122100966Sel1 domain protein repeat-containing proteinQuickGO ontologyBLASTP
11222941122593300IS3 OrfAQuickGO ontologyBLASTP
11225901123456867ISEc16 orfBQuickGO ontologyBLASTP
11235951124374780hypothetical proteinBLASTP
11263231126445123hypothetical protein
112650411277151212outer membrane protein NQuickGO ontologyBLASTP
11283981128676279outer membrane protein NQuickGO ontologyBLASTP
11287561129451696metal dependent phosphohydrolaseQuickGO ontologyBLASTP
112952511309551431modification methylase EcoRIIQuickGO ontologyBLASTP
11309361131406471very short patch repair proteinQuickGO ontologyBLASTP
11313951132315921carboxylateamino acidamine transporterQuickGO ontologyBLASTP