Pre_GI Gene

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Host: NC_013364 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013364:3701895 Escherichia coli O111:H- str. 11128, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
370189537040302136ornithine decarboxylase SpeC constitutiveQuickGO ontologyBLASTP
37044283705135708putative inner membrane proteinQuickGO ontologyBLASTP
3705241370531676tRNA-PheQuickGO ontologyBLASTP
370551437067731260putative integraseQuickGO ontologyBLASTP
37068903707141252BLASTP
37072173707543327putative IS629 transposase OrfAQuickGO ontologyBLASTP
37075403708430891putative IS629 transposase OrfBQuickGO ontologyBLASTP
37087903709749960BLASTP
37100333710248216hypothetical proteinBLASTP
371046937121181650T3SS secreted effector EspLQuickGO ontologyBLASTP
37127273713716990T3SS secreted effector NleBQuickGO ontologyBLASTP
37137653714439675T3SS secreted effector NleEQuickGO ontologyBLASTP
37148173715104288BLASTP
37151173715728612BLASTP
37159493716215267BLASTP
37163563717174819hypothetical proteinBLASTP
371730237184981197T3SS secreted effector EspGQuickGO ontologyBLASTP
37189343719800867putative IS3 transposase InsFQuickGO ontologyBLASTP
37197973720096300putative IS3 transposase InsEQuickGO ontologyBLASTP
37206113721399789T3SS secreted effector EspFQuickGO ontologyBLASTP
37215953721873279T3SS componentQuickGO ontologyBLASTP
37218793722100222T3SS structure protein EscFQuickGO ontologyBLASTP
37221353722542408chaperone CesD2QuickGO ontologyBLASTP
37225493723511963translocon EspBQuickGO ontologyBLASTP
372353237246741143translocon EspDQuickGO ontologyBLASTP
37246873725265579translocon EspAQuickGO ontologyBLASTP
372532437263791056secretion switching protein SepLQuickGO ontologyBLASTP
372652237277421221T3SS structure protein EscDQuickGO ontologyBLASTP
372803037308372808theta intiminQuickGO ontologyBLASTP
37308953731365471putative chaperone CesTQuickGO ontologyBLASTP
373150037331551656putative translocated intimin receptor TirQuickGO ontologyBLASTP
37334783734089612T3SS secreted effector MapQuickGO ontologyBLASTP
37343543734716363chaperone CesFQuickGO ontologyBLASTP
37348953735404510T3SS secreted effector EspHQuickGO ontologyBLASTP
37354353736352918T3SS structure protein SepQQuickGO ontologyBLASTP
37363153736731417putative T3SS component proteinQuickGO ontologyBLASTP
37367243737101378putative T3SS component proteinQuickGO ontologyBLASTP
373710437384441341translocator EscNQuickGO ontologyBLASTP
373842837404552028putative translocator EscVQuickGO ontologyBLASTP
37404523740805354regulator MpcQuickGO ontologyBLASTP
37409903741286297T3SS secreted effector EspZQuickGO ontologyBLASTP
37413183741746429chaperone Rorf8QuickGO ontologyBLASTP
37417493742321573T3SS structure protein EscJQuickGO ontologyBLASTP
37423273742782456secretion switching protein SepDQuickGO ontologyBLASTP
374278237443201539T3SS structure protein EscCQuickGO ontologyBLASTP
37443343744789456chaperone CesDQuickGO ontologyBLASTP
37451733745586414positive regulator GrlAQuickGO ontologyBLASTP
37456423746013372negative regulator GrlRQuickGO ontologyBLASTP
37462093746667459hypothetical proteinBLASTP
374666437477011038T3SS structure protein EscUQuickGO ontologyBLASTP
37476943748470777putative T3SS structure protein EscTQuickGO ontologyBLASTP
37484703748739270T3SS structure protein EscSQuickGO ontologyBLASTP
37487393749392654T3SS structure protein EscRQuickGO ontologyBLASTP
37493973750092696T3SS componentQuickGO ontologyBLASTP
37500373750636600T3SS componentQuickGO ontologyBLASTP
37506333750956324T3SS componentQuickGO ontologyBLASTP
37509603751178219T3SS componentQuickGO ontologyBLASTP
37511933751582390transcriptional regulator LerQuickGO ontologyBLASTP
37524203753244825putative IS2 transposase InsABQuickGO ontologyBLASTP
37532833753528246BLASTP
37536063753932327putative IS629 transposase OrfAQuickGO ontologyBLASTP
37539293754819891putative IS629 transposase OrfBQuickGO ontologyBLASTP
37550353755487453hypothetical proteinBLASTP
37568543757201348putative IS602 transposase OrfAQuickGO ontologyBLASTP
37573213758067747putative IS602 transposase OrfBQuickGO ontologyBLASTP
37582343758431198hypothetical proteinBLASTP
37585163759358843hypothetical proteinBLASTP
37596393760175537putative type II secretion protein GspMQuickGO ontologyBLASTP
376017737613551179putative type II secretion protein GspLQuickGO ontologyBLASTP
37613523762329978putative type II secretion protein GspKQuickGO ontologyBLASTP
37623263762895570putative type II secretion protein GspJQuickGO ontologyBLASTP
37629283763299372putative type II secretion protein GspIQuickGO ontologyBLASTP
37632963763826531putative type II secretion protein GspHQuickGO ontologyBLASTP