Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:5442000 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
54423605443133774ABC transporter relatedQuickGO ontologyBLASTP
54431455443897753extracellular solute-binding protein family 3QuickGO ontologyBLASTP
54439535444648696polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
54446455445334690polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
544542054466251206hypothetical proteinBLASTP
54469105447182273hypothetical proteinBLASTP
54471725447453282hypothetical proteinBLASTP
54479625448255294hypothetical proteinBLASTP
544859254499111320integrase family proteinQuickGO ontologyBLASTP
54508425451822981phage integraseQuickGO ontologyBLASTP
545224954547172469conserved hypothetical protein contains NB-ARC domainQuickGO ontology
54551155455402288transcriptional regulator XRE familyQuickGO ontologyBLASTP
545571854573791662Glutamate synthase NADPHQuickGO ontologyBLASTP
545752954588481320outer membrane porinQuickGO ontologyBLASTP
54592785459475198hypothetical protein
545965754607631107agmatine deiminaseQuickGO ontologyBLASTP
546091754638172901aminotransferase class-IIIQuickGO ontologyBLASTP
54640095464551543dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
54645485465408861dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP