Pre_GI: BLASTP Hits

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Query: NC_006569:370846:381777 Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence

Start: 381777, End: 382751, Length: 975

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Ruegeria pomeroyi is capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:2611702:262742326274232628379957Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family5e-43175
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family2e-40166
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 31e-36154
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR4e-35148
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family5e-35148
NC_015727:1357095:137833313783331379250918Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator2e-34146
NC_018691:4619245:462260946226094623520912Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LysR family2e-34146
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family1e-33144
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family1e-33144
NC_015138:272500:274941274941275930990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator2e-33143
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-33143
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator2e-33142
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator3e-33142
NC_007511:3512100:352254135225413523473933Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-32140
NC_007953:938346:945917945917946852936Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, LysR family4e-32139
NC_010623:1961685:196825519682551969184930Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-31135
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family4e-31135
NC_015379:4249238:426468542646854265602918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family9e-31134
NC_016830:2642881:264642726464272647344918Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator1e-30134
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-30133
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN3e-30132
NC_014012:1421979:142218014221801423097918Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family4e-30132
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family6e-30131
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein4e-29129
NC_015424:2316228:231775323177532318688936Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator4e-29129
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family4e-29129
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family4e-29129
NC_004463:2158116:218239221823922183336945Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-29129
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator3e-29129
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding3e-29129
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family2e-29129
NC_009656:4079319:408279240827924083724933Pseudomonas aeruginosa PA7 chromosome, complete genomeLysR family transcriptional regulator5e-29128
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family5e-29128
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family4e-29128
NC_009937:311242:314202314202315176975Azorhizobium caulinodans ORS 571, complete genomeputative transcriptional regulator8e-29127
NC_009439:1297851:130384013038401304802963Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-28127
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator1e-28127
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family3e-28126
NC_011000:2732330:279787027978702798769900Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein2e-28126
NC_014641:20103:310553105531963909Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebacterial regulatory helix-turn-helix protein, LysR family protein 2032e-28126
NC_015138:3160764:316968131696813170574894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator3e-28125
NC_009524:861500:878447878447879355909Psychrobacter sp. PRwf-1 chromosome, complete genomeLysR family transcriptional regulator1e-27124
NC_008541:2119883:213613321361332137020888Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-27123
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator2e-27123
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator4e-27122
NC_013446:2919005:293064129306412931594954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family4e-27122
NC_013446:2130021:214234221423422143295954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-27122
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family8e-27121
NC_020126:9938287:994969299496929950684993Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator7e-27121
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family6e-27121
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 12e-26119
NC_007952:3196085:322589732258973226814918Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, LysR family2e-26119
NC_016830:1645879:166625916662591667191933Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator3e-26119
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator4e-26119
NC_020211:103371:126887126887127789903Serratia marcescens WW4, complete genomeLysR family transcriptional regulator5e-26118
NC_011894:4066926:409482740948274095753927Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family2e-25117
NC_004460:1618892:163372816337281634660933Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator, LysR family1e-25117
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator1e-25117
NC_014966:328056:347027347027347971945Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysR-family transcriptional regulator3e-25116
NC_005140:340000:359000359000359944945Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator3e-25116
NC_011365:1865687:188826518882651889218954Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator6e-25115
NC_011000:3362382:337903133790313379969939Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein5e-25115
NC_004129:3452885:348876534887653489682918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family4e-25115
NC_019973:5989816:599273559927355993718984Mesorhizobium australicum WSM2073, complete genometranscriptional regulator3e-25115
NC_014923:6060859:606377860637786064761984Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLysR substrate-binding protein3e-25115
NC_015675:6615245:661844666184466619429984Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLysR family transcriptional regulator3e-25115
NC_010529:296500:311314311314312246933Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNodD transcriptional regulator; lysR family3e-25115
NC_017249:7993713:809553280955328096425894Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator6e-25114
NC_010125:1011430:101697210169721017925954Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family8e-25114
NC_011365:1865687:189835118983511899322972Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator2e-24113
NC_015957:7348269:739581873958187396717900Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLysR family transcriptional regulator2e-24113
NC_015733:2720183:273520827352082736122915Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator1e-24113
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator4e-24112
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-24112
NC_010505:5035668:504944150494415050385945Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family4e-24112
NC_015711:3546500:356156035615603562501942Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcripitonal regulator3e-24112
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT3e-24112
NC_020181:1317647:131764713176471318570924Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family2e-24112
NC_015376:2241000:225434222543422255334993Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator MexT2e-24112
NC_006371:1411335:144096814409681441873906Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcriptional regulator, LysR family7e-24111
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence9e-24110
NC_004463:2158116:218076621807662181758993Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-23110
NC_011365:502620:505292505292506218927Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator7e-23108
NC_010125:2295500:229847122984712299397927Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional Regulator, LysR family7e-23108
NC_011283:785973:800657800657801586930Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator1e-22107
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-22106
NC_012912:4167429:417109541710954172015921Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family3e-22105
NC_016027:2512297:2523752252375225248161065Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator4e-22105
NC_015663:3466471:348000034800003480920921Enterobacter aerogenes KCTC 2190 chromosome, complete genomeLysR family transcriptional regulator6e-22105
NC_010505:2530476:2551319255131925523201002Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family1e-21103
NC_014121:2090630:210224621022462103172927Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacterial regulatory protein, LysR2e-21103
NC_013446:2961647:296904529690452969968924Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-21102
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator7e-21101
NC_011368:678291:683316683316684248933Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,LysR family transcriptional regulator6e-21101
NC_010338:588000:591892591892592821930Caulobacter sp. K31, complete genometranscriptional regulator, LysR family1e-1997.4
NC_008392:1029134:106160010616001062565966Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family2e-1996.7
NC_008322:641197:656469656469657314846Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family3e-1995.9
NC_016613:2759908:276659327665932767510918Vibrio sp. EJY3 chromosome 1, complete sequenceLysR family transcriptional regulator4e-1995.5
NC_013592:2338403:235105423510542351965912Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family1e-1894.4
NC_011184:597496:615775615775616707933Vibrio fischeri MJ11 chromosome I, complete sequencetranscriptional regulator, LysR family1e-1894.4
NC_015968:2195645:222627322262732227205933Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator1e-1894
NC_009664:63230:832028320284113912Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, LysR family4e-1892.4
NC_015709:1459838:148508714850871486001915Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeLysR family transcriptional regulator6e-1892
NC_015727:1357095:137410813741081374824717Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator1e-1791.3
NC_011094:3778000:381359638135963814498903Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, LysR family protein2e-1687
NC_018678:87064:107354107354108277924Alteromonas macleodii str. 'English Channel 673' chromosome,LysR family transcriptional regulator2e-1686.7
NC_011894:585637:603301603301603588288Methylobacterium nodulans ORS 2060, complete genome6e-1685.1
NC_007645:3756654:375780337578033758747945Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-1582.4
NC_012796:3374911:338169533816953382615921Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1480.5
NC_012724:147454:164392164392165333942Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, LysR family protein2e-1480.5
NC_017047:4298207:431741043174104318366957Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator5e-1479
NC_015061:4203767:4223495422349542245111017Rahnella sp. Y9602 chromosome, complete genomeLysR family transcriptional regulator4e-1479
NC_010162:3177324:318092931809293181384456Sorangium cellulosum 'So ce 56', complete genomeLysR family transcriptional regulator7e-1478.2
NC_015514:3307199:331702833170283317954927Cellulomonas fimi ATCC 484 chromosome, complete genomeLysR family transcriptional regulator1e-1377.8
NC_016514:1183356:119434011943401195299960Enterobacter cloacae EcWSU1 chromosome, complete genomePCP degradation transcriptional activation protein1e-1377
NC_004603:1464000:146748614674861468466981Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetranscriptional regulator, LysR family3e-1376.3
NC_021177:7815791:782168178216817822586906Streptomyces fulvissimus DSM 40593, complete genomeLysR-family transcriptional regulator3e-1376.3
NC_015514:3351052:335105233510523351984933Cellulomonas fimi ATCC 484 chromosome, complete genomeLysR family transcriptional regulator4e-1375.9
NC_015730:3662934:366653636665363667375840Roseobacter litoralis Och 149 chromosome, complete genomeHTH-type LysR family transcriptional regulator7e-1374.7
NC_009997:2069894:208252920825292083422894Shewanella baltica OS195, complete genometranscriptional regulator, LysR family4e-1272.4
NC_016901:2070121:208311620831162084009894Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator4e-1272.4
NC_009512:3251545:327571832757183276020303Pseudomonas putida F1, complete genometranscriptional regulator, LysR family9e-1271.2
NC_011751:4373961:437649143764914377450960Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional regulator YidZ1e-1170.5
NC_016860:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-1170.5
NC_003197:25803:3336433364343681005Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-1170.5
NC_016810:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator (lysR family)2e-1170.1
NC_016856:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-1170.1
NC_016857:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-1170.1
NC_016863:25804:3336533365343691005Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-1170.1
NC_017046:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator (lysR family)2e-1170.1
NC_003198:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (lysR family)3e-1169.7
NC_004631:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator (lysR family)3e-1169.7
NC_006511:25796:333573335734352996Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator (lysR family)3e-1169.7
NC_011147:25836:333973339734392996Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-1169.7
NC_016832:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,LysR-family transcriptional regulator3e-1169.7
NC_002695:4678945:468147446814744682433960Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator LYSR-type3e-1169.7
NC_011353:4782040:478456947845694785528960Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding transcriptional regulator YidZ3e-1169.7
NC_013008:4738083:474061247406124741571960Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator YidZ3e-1169.7
NC_013941:4567820:456897045689704569929960Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding transcriptional regulator YidZ3e-1169.7
NC_010498:4166903:416943341694334170392960Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator2e-1169.7
NC_011750:4490573:449310344931034494062960Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator YidZ2e-1169.7
NC_009648:4497749:451456145145614515520960Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator YidZ4e-1169.3
NC_011205:25805:3336533365343691005Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator3e-1169.3
NC_011274:25692:3325233252342561005Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-1169.3
NC_011294:25569:3312133121341251005Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator3e-1169.3
NC_002655:4747926:475045547504554751414960Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator LYSR-type3e-1169.3
NC_016831:25760:3336533365343691005Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator (lysR family)3e-1169.3
NC_010067:2881448:289310228931022894100999Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1168.9
NC_011149:25760:3336633366343701005Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcriptional regulator5e-1168.9
NC_011080:25751:3335733357343611005Salmonella enterica subsp. enterica serovar Newport str. SL254,putative transcriptional regulator5e-1168.6
NC_011094:25762:3336833368343721005Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator1e-1067.4
NC_010501:4989455:498945549894554990393939Pseudomonas putida W619, complete genometranscriptional regulator, LysR family2e-1066.6
NC_020829:4429435:444388644438864444200315Pseudomonas denitrificans ATCC 13867, complete genomeLysR family transcriptional regulator4e-1065.9
NC_015379:2505233:253666425366642536948285Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family6e-1065.1
NC_007712:3629358:364621536462153646823609Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator2e-0963.5
NC_009832:1664238:167195616719561672858903Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family2e-0963.5
NC_016612:361417:367772367772368695924Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDNA-binding transcriptional regulator LysR2e-0963.2
NC_010508:981377:996474996474997394921Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family3e-0962.8
NC_018531:1900619:193350719335071934448942Arthrobacter sp. Rue61a chromosome, complete genomeLysR family transcriptional regulator3e-0962.8
NC_004347:4007847:402121940212194022190972Shewanella oneidensis MR-1, complete genometranscriptional regulator, LysR family4e-0962.4
NC_009725:3878862:388006538800653880955891Bacillus amyloliquefaciens FZB42, complete genomeYybE5e-0962.4
NC_008542:1021848:104322410432241044144921Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, LysR family1e-0860.8
NC_008060:476861:498577498577499497921Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, LysR family1e-0860.8
NC_007510:943068:962081962081963010930Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-0860.5
NC_020064:3157656:317869831786983179582885Serratia marcescens FGI94, complete genometranscriptional regulator2e-0860.5
NC_017030:6912830:691720969172096918075867Corallococcus coralloides DSM 2259 chromosome, complete genomeHTH-type transcriptional regulator AraB2e-0860.5
NC_014837:3633378:363507236350723636025954Pantoea sp. At-9b chromosome, complete genomeLysR family transcriptional regulator1e-0860.5
NC_019842:3921424:392335039233503924240891Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-0860.5
NC_009615:1469642:151261415126141513540927Parabacteroides distasonis ATCC 8503 chromosome, complete genomeredox-sensitive transcriptional activator OxyR2e-0860.1
NC_010623:1961685:2036705203670520377121008Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family7e-0858.5
NC_008027:3844355:388538238853823886296915Pseudomonas entomophila L48, complete genometranscriptional activator for lysine biosynthesis (LysR family)7e-0858.5
NC_020244:4020315:402031540203154021193879Bacillus subtilis XF-1, complete genomehypothetical protein6e-0858.5
NC_009436:1679265:167926516792651680176912Enterobacter sp. 638, complete genomeLysR family transcriptional regulator6e-0858.5
NC_005140:660305:668174668174669025852Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator6e-0858.5
NC_014966:638355:646226646226647077852Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator6e-0858.5
NC_020181:1317647:133611213361121337011900Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator6e-0858.5
NC_008541:2037793:205209120520912052987897Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, LysR family8e-0858.2
NC_015850:1947000:199290219929021993777876Acidithiobacillus caldus SM-1 chromosome, complete genomeLysR family transcriptional regulator YeiE8e-0858.2
NC_011000:3362382:336388733638873364831945Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative nitrogen assimilation regulatory protein Nac8e-0858.2
NC_008095:2031997:204256720425672043448882Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family7e-0858.2
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator7e-0858.2
CP002516:903241:936020936020936955936Escherichia coli KO11, complete genometranscriptional regulator, LysR family1e-0757.8
NC_007384:3151344:315134431513443152279936Shigella sonnei Ss046, complete genomepositive regulator for lys1e-0757.8
CP002185:3167738:316912231691223170057936Escherichia coli W, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
NC_012759:2862807:286419128641912865126936Escherichia coli BW2952 chromosome, complete genomeLysR family transcriptional regulator1e-0757.8
AC_000091:2976293:297767729776772978612936Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
NC_010473:3069529:307091330709133071848936Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
NC_000913:2975659:297704329770432977978936Escherichia coli K12, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
NC_010468:906957:940747940747941682936Escherichia coli ATCC 8739, complete genometranscriptional regulator, LysR family1e-0757.8
NC_009800:2995958:299734229973422998277936Escherichia coli HS, complete genometranscriptional activator protein LysR1e-0757.8
NC_020211:1655826:165757116575711658521951Serratia marcescens WW4, complete genometranscriptional activator of cyn operon, autorepressor1e-0757.8
CU928160:3030324:303032430303243031259936Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
NC_011748:3196173:319617331961733197108936Escherichia coli 55989, complete genomeDNA-binding transcriptional regulator LysR1e-0757.8
NC_014976:2175667:217706921770692177947879Bacillus subtilis BSn5 chromosome, complete genomeputative LysR family transcriptional regulator9e-0857.8
NC_016902:903241:936020936020936955936Escherichia coli KO11FL chromosome, complete genomeLysR family transcriptional regulator1e-0757.8
NC_016822:3282654:328403832840383284973936Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator LysR1e-0757.8
NC_013364:3552284:355228435522843553219936Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional dual regulator LysR1e-0757.8
NC_013361:3867558:386755838675583868493936Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator LysR1e-0757.8
NC_013353:3474077:347407734740773475012936Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional dual regulator LysR1e-0757.8
NC_011741:3030324:303032430303243031259936Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator LysR1e-0757.8
NC_011415:3217796:321779632177963218731936Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional regulator LysR1e-0757.8
CU928145:3196173:319617331961733197108936Escherichia coli 55989 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-0757.8
AP010958:3474077:347407734740773475012936Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional dual regulator LysR1e-0757.8
NC_010501:2609567:264371826437182644620903Pseudomonas putida W619, complete genometranscriptional regulator, LysR family2e-0757.4
NC_009801:3175714:317571431757143176649936Escherichia coli E24377A, complete genometranscriptional activator protein LysR1e-0757.4
NC_011740:2859933:287881128788112879731921Escherichia fergusonii ATCC 35469, complete genomeputative regulatory protein, LysR:LysR substrate-binding domain (fragment)1e-0757.4
NC_011750:3407500:340755534075553408490936Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator LysR1e-0757.4
NC_009659:543000:559636559636560520885Janthinobacterium sp. Marseille chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_020209:945000:954754954754955623870Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator1e-0757.4
NC_012792:310443:326696326696327595900Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, LysR family1e-0757.4
NC_017030:2728175:274143727414372742321885Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_011751:3285646:328564632856463286581936Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional regulator LysR2e-0757
NC_010512:1196616:121351712135171214446930Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, LysR family2e-0757
NC_015379:4282815:428725542872554288142888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0757
NC_011283:785973:804836804836805735900Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator3e-0756.6
NC_009831:1539159:155711015571101557952843Shewanella sediminis HAW-EB3, complete genometranscriptional regulator, LysR family2e-0756.6
NC_010557:1030319:103031910303191031242924Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_002655:3769643:376872137687213769656936Escherichia coli O157:H7 EDL933, complete genomepositive regulator for lys3e-0756.2
NC_002516:2306776:232633423263342327287954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-0756.2
NC_002695:3702344:370142237014223702357936Escherichia coli O157:H7 str. Sakai, complete genomepositive regulator for lys3e-0756.2
NC_011353:3805819:380581938058193806754936Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding transcriptional regulator LysR3e-0756.2
NC_013008:3761467:376054537605453761480936Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_013941:3540420:353949835394983540433936Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_000918:707801:719732719732720652921Aquifex aeolicus VF5, complete genometranscriptional regulator (LysR family)3e-0756.2
NC_008391:865340:868551868551869453903Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_007963:2644930:267530326753032676244942Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family3e-0756.2
NC_010557:207846:215435215435216322888Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_020064:3998715:401199840119984012903906Serratia marcescens FGI94, complete genometranscriptional regulator4e-0755.8
NC_000964:4164683:417963041796304180466837Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-0755.8
NC_021066:1778000:177836617783661779265900Raoultella ornithinolytica B6, complete genomeputative LysR family transcriptional regulator4e-0755.8
NC_015677:1460000:146190214619021462855954Ramlibacter tataouinensis TTB310 chromosome, complete genomeLysR family transcriptional regulator4e-0755.8
NC_003911:253400:260302260302261231930Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, LysR family4e-0755.8
NC_009831:2045811:205374920537492054660912Shewanella sediminis HAW-EB3, complete genometranscriptional regulator, LysR family4e-0755.8
NC_019896:17873:358003580036636837Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeHTH-type transcriptional regulator YybE6e-0755.5
NC_012988:4075429:409441740944174095379963Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator6e-0755.5
NC_015063:1:706770677936870Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceLysR family transcriptional regulator5e-0755.5
NC_015063:122000:706770677936870Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceLysR family transcriptional regulator5e-0755.5
NC_009512:2238437:224420022442002245156957Pseudomonas putida F1, complete genometranscriptional regulator, LysR family7e-0755.1
NC_014618:3482053:349761734976173498540924Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator7e-0755.1
NC_015563:4093650:411314241131424114005864Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_010172:3712000:372849037284903729452963Methylobacterium extorquens PA1, complete genomeLysR substrate-binding6e-0755.1
NC_012808:3711806:373296837329683733930963Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, LysR family6e-0755.1
NC_010725:3992948:401180540118054012767963Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family6e-0755.1
NC_007948:4558000:458517045851704586078909Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family1e-0654.7
NC_011892:306437:311139311139312089951Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetranscriptional regulator, LysR family1e-0654.7
NC_010086:871723:899395899395900306912Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family9e-0754.7
NC_004578:212468:237840237840238775936Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator LysR8e-0754.7
NC_003888:4314389:431438943143894315294906Streptomyces coelicolor A3(2), complete genomelysR-family transcriptional regulator8e-0754.7
NC_015379:2505233:254090225409022541798897Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family1e-0654.3
NC_007168:454000:458926458926459321396Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-0654.3
NC_007086:4489153:449064744906474491573927Xanthomonas campestris pv. campestris str. 8004, complete genometranscriptional regulator lysR family2e-0653.9
NC_003902:4430621:443306444330644433990927Xanthomonas campestris pv. campestris str. ATCC 33913, completeLysR family transcriptional regulator2e-0653.9
NC_015424:3277292:328098932809893281870882Aeromonas veronii B565 chromosome, complete genomeNodD transcription activator-like protein1e-0653.9
NC_016002:2037374:207456120745612075484924Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator1e-0653.9
NC_004129:5846415:587406258740625874964903Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family1e-0653.9
NC_009256:1282793:130779313077931308749957Burkholderia vietnamiensis G4 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0653.5
NC_009439:3485000:349808734980873498971885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-0653.5
NC_013421:1173051:119350311935031194384882Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family2e-0653.5
NC_004547:138500:151645151645152553909Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeLysR-family transcriptional regulator2e-0653.5
NC_012917:4646491:464962746496274650535909Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, LysR family2e-0653.5
CP002185:1493280:149328014932801494188909Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator2e-0653.1
NC_013174:23421:610676106761987921Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, LysR family2e-0653.1
NC_002655:301940:323657323657324556900Escherichia coli O157:H7 EDL933, complete genomeputative LysR-like transcriptional regulator2e-0653.1
NC_011353:305820:327536327536328435900Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_013008:306953:328848328848329747900Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_013941:338121:364629364629365528900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_009512:3618055:3618055361805536192481194Pseudomonas putida F1, complete genometranscriptional regulator, LysR family4e-0652.8
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family3e-0652.8
NC_012779:2064582:2070273207027320712741002Edwardsiella ictaluri 93-146, complete genomeHTH-type transcriptional regulator PecT3e-0652.8
NC_014500:4691915:469585346958534696839987Dickeya dadantii 3937 chromosome, complete genomeLysR-family transcriptional regulator3e-0652.8
NC_016612:2223357:223449122344912235438948Klebsiella oxytoca KCTC 1686 chromosome, complete genomeregulatory protein3e-0652.8
NC_013956:3641368:364340236434023644328927Pantoea ananatis LMG 20103 chromosome, complete genomeYybE3e-0652.8
NC_016816:792460:820167820167821093927Pantoea ananatis LMG 5342, complete genomeLysR family transcriptional regulator3e-0652.8
NC_017986:2548720:257136625713662572277912Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator4e-0652.4
NC_014815:4621552:464174646417464642708963Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, lysr family5e-0652.4
NC_008027:3844355:388407038840703884960891Pseudomonas entomophila L48, complete genometranscriptional regulator CynR6e-0652
NC_010682:1482365:149783114978311498769939Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0652
NC_014315:2327083:232708323270832328015933Nitrosococcus watsoni C-113 chromosome, complete genomelysR family transcriptional regulator5e-0652
NC_010002:2933909:294678329467832947643861Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family7e-0651.6
NC_006087:1334500:133839513383951339249855Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LysR family7e-0651.6
NC_008825:1113060:111928911192891120185897Methylibium petroleiphilum PM1, complete genometranscriptional regulator, LysR family7e-0651.6
NC_007948:4646344:466732446673244668238915Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family8e-0651.6
NC_016642:1990684:200285120028512003792942Pseudovibrio sp. FO-BEG1 chromosome, complete genomeLysR-family transcriptional regulator9e-0651.2
NC_015458:2338437:233971423397142340664951Pusillimonas sp. T7-7 chromosome, complete genomeLysR family transcriptional regulator1e-0551.2
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator1e-0551.2