Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:305820 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
305820306533714prophage repressorQuickGO ontologyBLASTP
306634306834201hypothetical proteinBLASTP
307109307246138regulatory protein CIIQuickGO ontologyBLASTP
307704308201498BLASTP
308198308509312replication protein P for prophage CP-933HQuickGO ontologyBLASTP
308509309303795tail fiber proteinQuickGO ontologyBLASTP
309303309896594tail fiber assembly protein-like proteinQuickGO ontologyBLASTP
309868310311444tail fiber assembly proteinQuickGO ontologyBLASTP
310332310742411tail fiber proteinQuickGO ontologyBLASTP
310772311326555DNA-invertaseQuickGO ontologyBLASTP
311384312157774hypothetical proteinBLASTP
312981313724744transcriptional regulatorQuickGO ontologyBLASTP
313766314131366IS2 ORF2QuickGO ontologyBLASTP
3146363158681233site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
316261316878618BLASTP
317220317336117hypothetical proteinBLASTP
317329317961633BLASTP
317992318381390BLASTP
318450318581132BLASTP
318581319147567hypothetical proteinBLASTP
319557319679123Ogr family transcription activatorQuickGO ontologyBLASTP
319835320386552polarity suppression proteinQuickGO ontologyBLASTP
320383321135753head size determination proteinQuickGO ontologyBLASTP
322069322329261phage DNA binding proteinQuickGO ontologyBLASTP
322551322883333protein ashQuickGO ontologyBLASTP
322880323101222hypothetical proteinBLASTP
323101323424324hypothetical proteinBLASTP
3234383257712334nucleoside triphosphatase D5 familyQuickGO ontologyBLASTP
325904326860957hypothetical proteinBLASTP
327536328435900LysR family transcriptional regulatorQuickGO ontologyBLASTP
328519329256738clavaldehyde dehydrogenaseQuickGO ontologyBLASTP
329423329701279hypothetical proteinBLASTP
329976330125150hypothetical proteinBLASTP
330404331288885LysR substrate binding domain-containing proteinQuickGO ontologyBLASTP
3314743326101137hydrolase of the alphabeta family proteinQuickGO ontologyBLASTP