Pre_GI Gene

Some Help

Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:306953 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
306953307246294cII antiterminator protein for prophage CP-933HQuickGO ontologyBLASTP
308198308509312replication protein P for prophage CP-933HQuickGO ontologyBLASTP
308509309303795tail fiber protein from prophage CP-933HQuickGO ontologyBLASTP
309303309896594hypothetical proteinBLASTP
309868310320453hypothetical proteinBLASTP
310332310766435hypothetical proteinBLASTP
310772311326555DNA invertase from prophage CP-933HQuickGO ontologyBLASTP
311384312157774hypothetical proteinBLASTP
312980313723744AraC family transcriptional regulatorQuickGO ontologyBLASTP
313765314130366hypothetical proteinBLASTP
315248316138891transposaseQuickGO ontologyBLASTP
316135316461327transposaseQuickGO ontologyBLASTP
318190318648459hypothetical proteinBLASTP
318641319273633hypothetical proteinBLASTP
319304319693390hypothetical proteinBLASTP
319893320459567hypothetical proteinBLASTP
320869321141273activator encoded in prophage CP-933IQuickGO ontologyBLASTP
321147321698552polarity suppression protein encoded in CP-933IQuickGO ontologyBLASTP
321695322447753capsid morphogenesis protein encoded in CP-933IQuickGO ontologyBLASTP
322850323020171hypothetical proteinBLASTP
323381323641261regulatory protein encoded in prophage CP-933IQuickGO ontologyBLASTP
323638324195558regulator encoded in prophage CP-933IQuickGO ontologyBLASTP
324413324736324hypothetical proteinBLASTP
3247503270832334alpha replication protein of prophage CP-933IQuickGO ontologyBLASTP
327216328172957hypothetical proteinBLASTP
328848329747900LysR family transcriptional regulatorQuickGO ontologyBLASTP
329846330568723oxidoreductaseQuickGO ontologyBLASTP
330735331013279hypothetical proteinBLASTP
331288331437150hypothetical proteinBLASTP
331716332600885LysR family transcriptional regulatorQuickGO ontologyBLASTP