Pre_GI Gene

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Host: NC_017986 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:2548720 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
254872025502551536phospholipase DtransphosphatidylaseQuickGO ontologyBLASTP
255029225514311140major facilitator family transporterQuickGO ontologyBLASTP
255154225530351494aldehyde dehydrogenaseQuickGO ontologyBLASTP
25531962553591396hypothetical proteinBLASTP
25536182553878261hypothetical protein
2553946255410115650S ribosomal protein L33QuickGO ontologyBLASTP
2554113255434923750S ribosomal protein L28QuickGO ontologyBLASTP
255471125563001590extracellular solute-binding proteinQuickGO ontologyBLASTP
25564352556557123DNA repair protein RadCQuickGO ontologyBLASTP
255661325578421230phage integrase family proteinQuickGO ontologyBLASTP
255783525594421608hypothetical proteinBLASTP
255943925618412403hypothetical proteinBLASTP
25618382562197360hypothetical protein
25622062562628423hypothetical proteinBLASTP
25627122563032321helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
25631822563541360hypothetical proteinBLASTP
25640012564105105hypothetical protein
25641652564485321ISPpu14 transposase Orf1QuickGO ontologyBLASTP
25644822564817336ISPpu14 transposase Orf2QuickGO ontologyBLASTP
256488125664161536transposase IS66QuickGO ontologyBLASTP
25664892566593105hypothetical protein
25668892567809921hypothetical proteinBLASTP
256794025697691830X-Pro dipeptidyl-peptidase domain-containing proteinQuickGO ontologyBLASTP
256981425712531440C4-dicarboxylate anaerobic carrierQuickGO ontologyBLASTP
25713662572277912LysR family transcriptional regulatorQuickGO ontologyBLASTP
257248025737061227outer membrane porinQuickGO ontologyBLASTP
25737752573903129hypothetical proteinBLASTP
257403025757271698hypothetical proteinBLASTP
25761682576374207hypothetical proteinBLASTP
25764492576625177hypothetical protein
25766092577514906cation diffusion facilitator family transporterQuickGO ontologyBLASTP
25776722578022351hypothetical proteinBLASTP
25780552578381327hypothetical proteinBLASTP
25784202578575156hypothetical protein
25787222578859138hypothetical protein
25790862579745660DNA-binding response regulator CzrRQuickGO ontologyBLASTP
257974225811601419sensor histidine kinaseQuickGO ontologyBLASTP
25812182581805588hypothetical proteinBLASTP
25820722582293222hypothetical proteinBLASTP
258237625838301455glycosyl transferase family proteinQuickGO ontologyBLASTP
25838242584768945ribonuclease IIIQuickGO ontologyBLASTP
25847732585192420GtrA family proteinQuickGO ontologyBLASTP
25854502586418969LysR family transcriptional regulatorQuickGO ontologyBLASTP
258662925879361308phosphate-selective porin O and PQuickGO ontologyBLASTP
25880462588279234hypothetical protein
25882832588480198hypothetical protein
25884902589260771hypothetical proteinBLASTP
25893882589612225hypothetical proteinBLASTP
258970325917001998heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
25919022592225324hypothetical proteinBLASTP
259238825955493162CzcA family heavy metal efflux proteinQuickGO ontologyBLASTP
259557425968241251RND family efflux transporter MFP subunitQuickGO ontologyBLASTP
259689325980771185outer membrane efflux proteinQuickGO ontologyBLASTP
25980882598195108hypothetical protein
259856925999121344porinQuickGO ontologyBLASTP
26000462600195150hypothetical protein
26004022601076675DNA-binding heavy metal response regulatorQuickGO ontologyBLASTP
26012022601525324hypothetical proteinBLASTP
26016722601908237hypothetical protein
26019152602043129hypothetical protein
26021242602663540hypothetical protein
26027632603296534hypothetical proteinBLASTP
26032892604185897ymc-like proteinQuickGO ontologyBLASTP
26041822604415234hypothetical protein