Pre_GI Gene

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Host: NC_005140 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005140:660305 Vibrio vulnificus YJ016 chromosome II, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6603056633703066putative exonuclease SbcCQuickGO ontologyBLASTP
6637946676543861hypothetical proteinBLASTP
668174669025852transcriptional regulatorQuickGO ontologyBLASTP
669669669959291hypothetical proteinBLASTP
669889670008120hypothetical protein
669977670795819hypothetical proteinBLASTP
6707986721231326rough colony protein RcpAQuickGO ontologyBLASTP
672123672584462hypothetical proteinBLASTP
6725846737861203hypothetical proteinBLASTP
6737836750481266TadA proteinQuickGO ontologyBLASTP
675045675962918Flp pilus assembly protein TadBQuickGO ontologyBLASTP
675959676837879Flp pilus assembly protein TadCQuickGO ontologyBLASTP
6768306779781149Flp pilus assembly protein TadDQuickGO ontologyBLASTP
677975678502528hypothetical proteinBLASTP
678429679073645hypothetical proteinBLASTP
6790276803551329hypothetical proteinBLASTP
680327680923597outer membrane proteinQuickGO ontologyBLASTP