Pre_GI Gene

Some Help

Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:4167500 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
416763341698882256catalaseperoxidase HPIQuickGO ontologyBLASTP
41702754171180906transcriptional regulator LysR familyQuickGO ontologyBLASTP
41712404172118879hypothetical proteinBLASTP
41723634173187825oxidoreductase aldoketo reductase familyQuickGO ontologyBLASTP
41732024173774573hypothetical proteinBLASTP
41750344175186153hypothetical protein
417531641774272112hypothetical proteinBLASTP
417742441796102187hypothetical proteinBLASTP
418013241815951464hypothetical proteinBLASTP
41816584181981324hypothetical proteinBLASTP
418221941842222004hypothetical proteinBLASTP
418421941858771659helicase putativeQuickGO ontologyBLASTP
41859284186080153hypothetical proteinBLASTP
418665041878911242hypothetical proteinBLASTP
41881014188400300hypothetical proteinBLASTP
41897604189942183hypothetical protein
41917744191944171hypothetical protein
41927184192963246BLASTP
41949714195669699hypothetical proteinBLASTP
419816241991691008serinethreonine protein phosphatase putativeQuickGO ontologyBLASTP
419971142010331323hypothetical protein
420114842077716624DNA helicase-related proteinQuickGO ontologyBLASTP
420804442107192676hypothetical proteinBLASTP
42111224211487366transcriptional regulator MvaT P16 subunit putativeQuickGO ontologyBLASTP
42116524212611960hypothetical proteinBLASTP
421256942137201152hypothetical proteinBLASTP
421372742149471221hypothetical proteinBLASTP
421495442170382085hypothetical proteinBLASTP
421779342192921500hypothetical proteinBLASTP
421943142211371707hypothetical proteinBLASTP
422139942226281230hypothetical protein
42226474222850204hypothetical protein
42228654223032168hypothetical protein
42230904223884795hypothetical protein
42247054224920216hypothetical protein
422492142260931173hypothetical proteinBLASTP
42268804227839960hypothetical proteinBLASTP
422878842302031416hypothetical proteinBLASTP
423022442312611038hypothetical proteinBLASTP
42313774231736360hypothetical proteinBLASTP
42323284232789462hypothetical proteinBLASTP
423354942350601512sensory box proteinQuickGO ontologyBLASTP
42352224235716495hypothetical proteinBLASTP
42358334236768936catechol 12-dioxygenaseQuickGO ontologyBLASTP
42368124237102291muconolactone isomeraseQuickGO ontologyBLASTP
423712442382451122muconate cycloisomeraseQuickGO ontologyBLASTP
42383814239253873transcriptional activator CatRQuickGO ontologyBLASTP
42393864240285900transcriptional regulator LuxR familyQuickGO ontologyBLASTP
424028242416941413hypothetical proteinBLASTP
424172942428321104periplasmic polyamine-binding protein putativeQuickGO ontologyBLASTP
42430264243733708NADPH quinone oxidoreductase putativeQuickGO ontologyBLASTP