Pre_GI: BLASTP Hits

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Query: NC_002947:4167500:4239386 Pseudomonas putida KT2440, complete genome

Start: 4239386, End: 4240285, Length: 900

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015186:2197236:220374422037442204640897Acidiphilium multivorum AIU301, complete genomeLuxR family transcriptional regulator2e-30133
NC_004129:3123000:312730831273083128099792Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LuxR family1e-27124
NC_008027:3844355:386445738644573865245789Pseudomonas entomophila L48, complete genometranscriptional regulator, LuxR family3e-27122
NC_009672:30000:325033250333291789Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeresponse regulator receiver protein4e-26118
NC_002947:4362271:437030543703054371102798Pseudomonas putida KT2440, complete genometranscriptional regulator, LuxR family9e-26117
NC_015379:3175500:318305931830593183796738Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative response regulator, NarL family3e-25115
NC_008027:3844355:386009638600963860908813Pseudomonas entomophila L48, complete genometranscriptional regulator, LuxR family7e-25114
NC_016830:3697173:370346837034683703962495Pseudomonas fluorescens F113 chromosome, complete genomeLuxR family transcriptional regulator2e-1893.2
NC_015637:819233:824159824159824977819Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLysR family transcriptional regulator4e-1685.5
NC_016628:1190366:119468511946851195527843Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, LuxR family9e-1684.3
NC_012779:3652737:365571536557153656305591Edwardsiella ictaluri 93-146, complete genometranscriptional regulatory protein UhpA5e-0858.9
NC_011149:3895921:391506639150663915656591Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulatory protein UhpA1e-0757.4
NC_011080:3941909:396113839611383961728591Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulatory protein UhpA1e-0757.4
NC_006511:3759550:377868537786853779275591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtwo-component system response regulator protein1e-0757.4
NC_010102:3919999:393864839386483939238591Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0757.4
NC_011094:3853036:387226638722663872856591Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding transcriptional activator UhpA1e-0757.4
NC_011147:3755725:377436437743643774954591Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding transcriptional activator UhpA1e-0757.4
NC_003197:3971905:399055439905543991144591Salmonella typhimurium LT2, complete genomeresponse regulator1e-0757.4
NC_011083:3985618:400476340047634005353591Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulatory protein UhpA1e-0757.4
NC_004337:3590323:390070439007043901294591Shigella flexneri 2a str. 301, complete genomeresponse regulator1e-0757.4
NC_017046:3991551:401069440106944011284591Salmonella enterica subsp. enterica serovar Typhimurium str. 798two-component system response regulator protein1e-0757.4
NC_016863:3933848:395185339518533952443591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-binding transcriptional activator UhpA1e-0757.4
NC_016860:4055117:409566540956654096255591Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding transcriptional activator UhpA1e-0757.4
NC_016856:3985597:400424640042464004836591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-binding transcriptional activator UhpA1e-0757.4
NC_016810:3993863:401186640118664012456591Salmonella enterica subsp. enterica serovar Typhimurium strtwo-component system response regulator protein1e-0757.4
NC_012125:3905782:392501239250123925665654Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-binding transcriptional activator UhpA1e-0757
NC_006905:3913988:393022039302203930873654Salmonella enterica subsp. enterica serovar Choleraesuis strresponse regulator (repressor) in two-component regulatory system wtih UhpB, regulates uhpT operon (LuxR/UhpA family)1e-0757
NC_016857:3993864:401186740118674012520654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA-binding transcriptional activator UhpA2e-0757
NC_011601:4096427:415036341503634150953591Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional activator UhpA2e-0756.6
NC_017033:2758582:2759804275980427625362733Frateuria aurantia DSM 6220 chromosome, complete genomeATP-dependent transcriptional regulator6e-0755.1
NC_020064:79422:103919103919104509591Serratia marcescens FGI94, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain6e-0755.1
NC_014829:259707:270126270126270740615Bacillus cellulosilyticus DSM 2522 chromosome, complete genometwo component transcriptional regulator, LuxR family9e-0754.7
NC_021066:4177217:417662741766274177220594Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional activator UhpA9e-0754.7
NC_015738:2956398:296514029651402965424285Eggerthella sp. YY7918, complete genomeDNA-binding HTH domain-containing protein1e-0654.3
NC_010465:62348:941229412294712591Yersinia pseudotuberculosis YPIII, complete genometwo component transcriptional regulator, LuxR family1e-0653.9
NC_015738:629297:636439636439637191753Eggerthella sp. YY7918, complete genomeDNA-binding HTH domain-containing protein2e-0653.5
NC_008150:4601202:461591146159114616501591Yersinia pestis Antiqua, complete genometwo-component system response regulator2e-0653.5
NC_015224:4386599:439299643929964393586591Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,two-component system response regulator2e-0653.1
NC_012962:869295:873436873436874068633Photorhabdus asymbiotica, complete genometwo-component response regulator. hexose phosphate transport syste regulatory protein uhpa3e-0652.8
NC_003198:3855157:385765238576523858242591Salmonella enterica subsp. enterica serovar Typhi str. CT18,Two-component system response regulator protein3e-0652.8
NC_004631:3841975:384314238431423843732591Salmonella enterica subsp. enterica serovar Typhi Ty2, completetwo-component system response regulator protein3e-0652.8