Pre_GI: BLASTP Hits

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Query: NC_002947:4167500:4182219 Pseudomonas putida KT2440, complete genome

Start: 4182219, End: 4184222, Length: 2004

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010682:3313944:3328351332835133302551905Ralstonia pickettii 12J chromosome 1, complete sequenceSMC domain protein0751
NC_017506:1222000:1229809122980912318692061Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein0747
NC_016901:5130147:5159540515954051614591920Shewanella baltica OS678 chromosome, complete genomeSMC domain-containing protein0720
NC_009997:5188221:5218918521891852208371920Shewanella baltica OS195, complete genomeATP-dependent endonuclease of the OLD family0720
NC_008757:151862:1683401683401702771938Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completetranscriptional regulator, Fis family0653
NC_014376:3732547:3759236375923637612992064Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein2e-107390
NC_009442:908507:9085079085079105942088Streptococcus suis 05ZYH33 chromosome, complete genomehypothetical protein4e-103376
NC_018665:2163713:2175404217540421774522049Exiguobacterium antarcticum B7 chromosome, complete genomeHypothetical protein1e-100367
NC_004578:20738:6207862078640631986Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-98359
NC_012880:3421500:3442349344234934443281980Dickeya dadantii Ech703, complete genomeputative exonuclease5e-96352
NC_009429:401500:4096894096894116621974Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completeATP-dependent exoDNAse beta subunit5e-96352
NC_015563:4629436:4643129464312946450631935Delftia sp. Cs1-4 chromosome, complete genomeSMC domain-containing protein1e-92341
NC_008209:3313087:3314733331473333158241092Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-89330
NC_007912:231817:2523342523342543342001Saccharophagus degradans 2-40, complete genomeATPase2e-88327
NC_010554:2646806:2663903266390326658671965Proteus mirabilis HI4320, complete genomeplasmid-related protein3e-87323
NC_013166:32474:6755567555695401986Kangiella koreensis DSM 16069, complete genomehypothetical protein1e-80301
NC_012731:560199:572413572413573402990Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative exonuclease1e-48195
NC_012731:560199:5734025734025744331032Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative exonuclease7e-44179
NC_005773:1333863:134306513430651343706642Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein8e-1996.3
NC_011740:2859933:2868232286823228702802049Escherichia fergusonii ATCC 35469, complete genomehypothetical protein5e-1790.1
NC_007974:2048000:2083641208364120854371797Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative exonuclease2e-1584.7
NC_014311:3076519:3095153309515330969521800Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-1584.7
NC_003552:2634828:2644101264410126461702070Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1481.3
NC_010688:2781624:2832215283221528340021788Xanthomonas campestris pv. campestris, complete genomeHypothetical protein ybjD.6e-1376.6
NC_009138:1974935:2008206200820620099901785Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-1375.9
NC_009801:3374501:3385117338511733869401824Escherichia coli E24377A, complete genomehypothetical protein3e-1274.3
NC_016943:21364:2534925349270461698Blastococcus saxobsidens DD2, complete genomeputative exonuclease2e-1068.6
NC_012691:2614603:2652902265290226546891788Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-1067.8
NC_013421:1780722:1780722178072217825121791Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1067.8
NC_009075:15017:2882528825306091785Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein6e-0963.2
NC_013131:7945280:7983002798300279850112010Catenulispora acidiphila DSM 44928, complete genomeATP-dependent OLD family endonuclease1e-0862.4
NC_017075:1869326:1894786189478618966031818Rubrivivax gelatinosus IL144, complete genomehypothetical protein1e-0862.4
NC_021184:1484352:1502760150276015045771818Desulfotomaculum gibsoniae DSM 7213, complete genomeputative ATP-dependent endonuclease of the OLD family2e-0861.6
NC_013850:1753716:1761023176102317628071785Klebsiella variicola At-22 chromosome, complete genomehypothetical protein7e-0859.7
NC_013204:989103:99948499948410011781695Eggerthella lenta DSM 2243, complete genomeSMC domain protein1e-0758.9
NC_018645:3029785:3038101303810130402422142Desulfobacula toluolica Tol2, complete genomeDNA replication and repair protein, relted to recF1e-0758.9
NC_018080:6048516:6081826608182660836761851Pseudomonas aeruginosa DK2 chromosome, complete genomeATP-dependent endonuclease family protein3e-0757.4
NC_010170:209514:2255732255732273901818Bordetella petrii, complete genomehypothetical protein5e-0757
NC_015387:1091403:1098920109892011003771458Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeSMC domain protein6e-0756.6
NC_009921:3255833:3265314326531432671401827Frankia sp. EAN1pec, complete genomeATP-dependent endonuclease of the OLD family-like protein7e-0756.2
NC_010465:3431500:3435097343509734371452049Yersinia pseudotuberculosis YPIII, complete genomeSMC (structural maintenance of chromosomes) family protein1e-0655.8
NC_020209:47504:5667556675585461872Pseudomonas poae RE*1-1-14, complete genomeATP-dependent endonuclease family protein1e-0655.5
NC_013132:5250385:5272842527284252751842343Chitinophaga pinensis DSM 2588, complete genomeATP-dependent endonuclease, OLD family5e-0653.5
NC_018750:6132619:6135635613563561374731839Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein6e-0653.1
NC_011206:262844:2789572789572812782322Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP-dependent endonuclease, OLD family7e-0652.8