Pre_GI Gene

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Host: CP002185 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002185:1493280 Escherichia coli W, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14932801494188909predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
14941691494348180Novel sRNA function unknownQuickGO ontology
14945181495081564conserved hypothetical proteinBLASTP
149510214963341233predicted diguanylate cyclase GGDEF domain signaling proteinQuickGO ontologyBLASTP
14965891497572984predicted ZnII transporterQuickGO ontologyBLASTP
1497902149797675C0343 RNAQuickGO ontology
149805014994231374ATP-dependent RNA helicase specific for 23S rRNAQuickGO ontologyBLASTP
14995521500487936predicted C32 tRNA thiolaseQuickGO ontologyBLASTP
150053915017741236Rac prophage integraseQuickGO ontologyBLASTP
15017761501991216Rac prophage conserved proteinQuickGO ontologyBLASTP
15020701502279210Rac prophage predicted proteinQuickGO ontologyBLASTP
15025231503332810Rac prophage recombination and repair proteinQuickGO ontologyBLASTP
150332515059252601Rac prophage exonuclease VIII 5 -3 specific dsDNA exonucleaseQuickGO ontologyBLASTP
15060271506302276Rac prophage predicted proteinQuickGO ontologyBLASTP
15063771506547171Rac prophage conserved proteinQuickGO ontologyBLASTP
15065471506768222Rac prophage inhibitor of FtsZ killing proteinQuickGO ontologyBLASTP
1506949150700355putative DicF ncRNAQuickGO ontology
15071891507341153Rac prophage predicted proteinQuickGO ontologyBLASTP
15073521507486135Rac prophage predicted proteinQuickGO ontologyBLASTP
15077721508191420putative transcriptional regulatorQuickGO ontologyBLASTP
15082711508525255putative transcriptional regulatorQuickGO ontologyBLASTP
15085221508944423Rac prophage predicted proteinQuickGO ontologyBLASTP
15089571509814858Rac prophage conserved proteinQuickGO ontologyBLASTP
15098211510567747Rac prophage predicted DNA replication proteinQuickGO ontologyBLASTP
15105901511351762putative transcription regulatory proteinQuickGO ontologyBLASTP
15113671511789423conserved hypothetical proteinBLASTP
151197315131001128conserved hypothetical proteinBLASTP
151309315142021110conserved hypothetical proteinBLASTP
15141991515176978conserved hypothetical proteinBLASTP