Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:2238437 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22379012238440540hypothetical protein
223843722396301194Propeptide PepSY amd peptidase M4QuickGO ontologyBLASTP
223980822411421335Lysineornithine N-monooxygenase-like proteinQuickGO ontologyBLASTP
22413172241763447hypothetical protein
22421802243106927peptidase S11 D-alanyl-D-alanine carboxypeptidase 1QuickGO ontologyBLASTP
22433932244109717phage integrase family proteinQuickGO ontologyBLASTP
22442002245156957transcriptional regulator LysR familyQuickGO ontologyBLASTP
22451982245629432glutathione-dependent formaldehyde-activating GFAQuickGO ontologyBLASTP
22461622247145984luciferase family proteinQuickGO ontologyBLASTP
22475612247863303hypothetical proteinBLASTP
224809222491921101low temperature requirement AQuickGO ontologyBLASTP
22492912249830540DSBA oxidoreductaseQuickGO ontologyBLASTP
22498422250384543alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
225129422524601167putative transcriptional regulator GntR familyQuickGO ontologyBLASTP
22525412252984444transcriptional regulator MarR familyQuickGO ontologyBLASTP
22538452254519675Alginate lyase 2QuickGO ontologyBLASTP
22547542255077324protein of unknown function DUF1654QuickGO ontologyBLASTP
22551162255985870putative phage repressorQuickGO ontologyBLASTP
22561052256419315hypothetical proteinBLASTP
22565092256691183hypothetical proteinBLASTP
22567862257139354hypothetical protein
22573012258122822Shikimate dehydrogenase substrate binding N-terminal domain proteinQuickGO ontologyBLASTP
22581792258421243hypothetical proteinBLASTP
22585192259046528lactoylglutathione lyaseQuickGO ontologyBLASTP
22592712259675405hypothetical proteinBLASTP
225999222612811290outer membrane porinQuickGO ontologyBLASTP
22613492262098750precorrin-6A synthase deacetylatingQuickGO ontologyBLASTP
22621682262518351response regulator receiver proteinQuickGO ontologyBLASTP