Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:2642881 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26428812643642762short-chain dehydrogenaseQuickGO ontologyBLASTP
26437272644086360GNAT family acetyltransferaseQuickGO ontologyBLASTP
26443442644829486putative integron gene cassette proteinQuickGO ontologyBLASTP
26456562646042387hypothetical proteinBLASTP
26464272647344918LysR family transcriptional regulatorQuickGO ontologyBLASTP
26474292648220792NADPH dehydrogenase quinoneQuickGO ontologyBLASTP
26484282648760333transposase is3 is911 family proteinQuickGO ontologyBLASTP
26487572649092336ISPpu14 transposase Orf2QuickGO ontologyBLASTP
264912726507221596protein TnpC3QuickGO ontologyBLASTP
265080526518601056hypothetical proteinBLASTP
265304126566073567reticulocyte binding proteinQuickGO ontologyBLASTP
265705526582691215Response regulator receiver domain proteinQuickGO ontologyBLASTP
26584862658647162hypothetical proteinBLASTP
26591962660062867LysR family transcriptional regulatorQuickGO ontologyBLASTP
26601652661082918drugmetabolite transporter permeaseQuickGO ontologyBLASTP
26616672662209543hypothetical proteinBLASTP
26622852662923639nitrogen regulation protein NRIQuickGO ontologyBLASTP
266291026639681059Sensor histidine kinaseQuickGO ontologyBLASTP
266403326653371305nitratesulfonatebicarbonate ABC transporter ATPaseQuickGO ontologyBLASTP
266534926670971749anion ABC transporter permeaseQuickGO ontologyBLASTP
26678192668352534transposase-like proteinQuickGO ontologyBLASTP
266866926697421074protein CheB2QuickGO ontologyBLASTP
26697452670242498protein CheD2QuickGO ontologyBLASTP
26702392671075837protein CheR2QuickGO ontologyBLASTP
26710722671608537protein CheW3QuickGO ontologyBLASTP
267164826733061659methyl-accepting chemotaxis protein I serine chemoreceptor proteinQuickGO ontologyBLASTP