Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:3251545 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
325154532527021158phage integrase family proteinQuickGO ontologyBLASTP
32538103254592783regulatory protein IclRQuickGO ontologyBLASTP
325477832559831206efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
325599832591383141transporter hydrophobeamphiphile efflux-1 HAE1 familyQuickGO ontologyBLASTP
325913532605771443RND efflux system outer membrane lipoprotein NodT familyQuickGO ontologyBLASTP
32606573260833177hypothetical proteinBLASTP
32609623261582621response regulator receiver proteinQuickGO ontologyBLASTP
326157932645152937multi-sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
326472932657871059pyruvate carboxyltransferaseQuickGO ontologyBLASTP
32657983266748951Acetaldehyde dehydrogenase-like proteinQuickGO ontologyBLASTP
326685632676628074-oxalocrotonate decarboxylaseQuickGO ontologyBLASTP
32677843268659876Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
32686753269502828short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
326949932707311233FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
32707313271054324Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
32710633271626564Toluene dioxygenaseQuickGO ontologyBLASTP
327173732730891353ring hydroxylating dioxygenase alpha subunitQuickGO ontologyBLASTP
32731863274016831alphabeta hydrolase foldQuickGO ontologyBLASTP
327404232754031362membrane protein involved in aromatic hydrocarbon degradationQuickGO ontologyBLASTP
32757183276020303transcriptional regulator LysR familyQuickGO ontologyBLASTP
3276563327664684hypothetical protein