Pre_GI Gene

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Host: NC_007086 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:4489153 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44885904489156567hypothetical proteinBLASTP
448915344902231071rhizopine catabolism proteinQuickGO ontologyBLASTP
44906474491573927transcriptional regulator lysR familyQuickGO ontologyBLASTP
44915794492151573hypothetical proteinBLASTP
44923224492798477hypothetical proteinBLASTP
44928394492982144transcriptional regulatorQuickGO ontologyBLASTP
449300444945091506response regulatorQuickGO ontologyBLASTP
44946094495469861histidine kinaseresponse regulator hybrid proteinQuickGO ontologyBLASTP
44961864497028843avirulence proteinQuickGO ontologyBLASTP
44974534497746294ISxac3 transposaseQuickGO ontologyBLASTP
44977644498618855ISxac3 transposaseQuickGO ontologyBLASTP
4498738449881376tRNA-MetQuickGO ontologyBLASTP
44990984499289192hypothetical proteinBLASTP
449959845014721875RNA polymerase sigma factorQuickGO ontologyBLASTP
45015804502020441D-tyrosyl-tRNA deacylaseQuickGO ontologyBLASTP
45021204503034915lipid A biosynthesis lauroyl acyltransferaseQuickGO ontologyBLASTP
45031744503695522phosphinothricin acetyltransferaseQuickGO ontologyBLASTP
450394145050741134GTP cyclohydrolaseQuickGO ontologyBLASTP
45052144505690477hypothetical proteinBLASTP
450568745071891503hypothetical proteinBLASTP