Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:1645879 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
164587916469491071protein YfgOQuickGO ontologyBLASTP
16470061647479474protein BcpQuickGO ontologyBLASTP
16474901648050561protein GcvRQuickGO ontologyBLASTP
16483661649244879dihydrodipicolinate synthaseQuickGO ontologyBLASTP
164926216503771116putative lipoproteinQuickGO ontologyBLASTP
16503821651140759beta-lactamaseQuickGO ontologyBLASTP
16511691651882714protein PurCQuickGO ontologyBLASTP
1651966165205287tRNA-OTHERQuickGO ontologyBLASTP
16522011652911711hypothetical proteinBLASTP
16531441653872729hypothetical proteinBLASTP
16539291654579651hypothetical proteinBLASTP
16548731655097225hypothetical protein
16553481656220873hypothetical protein
16563471657159813hypothetical proteinBLASTP
165763816588881251transposaseQuickGO ontologyBLASTP
166055916621931635methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
16622071662953747Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
16629651663333369Mannose-6-phosphate isomeraseQuickGO ontologyBLASTP
16634361664242807araC family transcriptional regulatorQuickGO ontologyBLASTP
16644521664643192hypothetical proteinBLASTP
16648631665786924LysR family transcriptional regulatorQuickGO ontologyBLASTP
16658901666255366putative 5-carboxymethyl-2-hydroxymuconate delta isomeraseQuickGO ontologyBLASTP
16662591667191933LysR family transcriptional regulatorQuickGO ontologyBLASTP
166771316690951383glutamine synthetaseQuickGO ontologyBLASTP
166926316709121650transmembrane sulfataseQuickGO ontologyBLASTP