Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:4989455 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
49894554990393939transcriptional regulator LysR familyQuickGO ontologyBLASTP
49904194990925507transcriptional regulator MarR familyQuickGO ontologyBLASTP
49910514991863813alphabeta hydrolase foldQuickGO ontologyBLASTP
499185649930281173major facilitator superfamily MFS_1QuickGO ontologyBLASTP
49931834993404222hypothetical proteinBLASTP
49945744995152579plasmid pRiA4b ORF-3 family proteinQuickGO ontologyBLASTP
49956704995864195transposase IS256 familyQuickGO ontologyBLASTP
49964534996839387Carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
499686549981391275outer membrane porinQuickGO ontologyBLASTP
49982834998810528Cupin 2 conserved barrel domain proteinQuickGO ontologyBLASTP
499896350000001038transcriptional regulator AraC familyQuickGO ontologyBLASTP
500013550010769423-hydroxyacyl-CoA dehydrogenase NAD-bindingQuickGO ontologyBLASTP
50010825002020939protein of unknown function DUF849QuickGO ontologyBLASTP
500213250034961365major facilitator superfamily MFS_1QuickGO ontologyBLASTP
50037355004379645Resolvase domainQuickGO ontologyBLASTP
50045745005338765hypothetical proteinBLASTP
500614250075631422integrase family proteinQuickGO ontologyBLASTP
5007574500764976tRNA-ThrQuickGO ontologyBLASTP
50077205008130411Fimbrial protein pilinQuickGO ontologyBLASTP
500834650095541209type II secretion system proteinQuickGO ontologyBLASTP
50095575010423867Prepilin peptidaseQuickGO ontologyBLASTP
50104235011046624dephospho-CoA kinaseQuickGO ontologyBLASTP
50110435011243201protein of unknown function DUF329QuickGO ontologyBLASTP
50113745012114741hypothetical proteinBLASTP
50121495012778630Protein of unknown function DUF1780QuickGO ontologyBLASTP
50129115013084174hypothetical proteinBLASTP
501316950144641296FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP