Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:25836 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25836284572622fimbrial usherQuickGO ontologyBLASTP
28458294651008fimbrial subunitQuickGO ontologyBLASTP
2946630011546fimbrial subunitQuickGO ontologyBLASTP
3053831242705fimbrial chaperoneQuickGO ontologyBLASTP
3130732152846hypothetical proteinBLASTP
3219132478288hypothetical proteinBLASTP
3257833027450hypothetical proteinBLASTP
3339734392996transcriptional regulatorQuickGO ontologyBLASTP
3440934846438transcriptional regulatorQuickGO ontologyBLASTP
35369370871719sulfataseQuickGO ontologyBLASTP
37133387041572secreted 5-nucleotidaseQuickGO ontologyBLASTP
3880339564762hypothetical proteinBLASTP
41732429191188sulfatase regulatory proteinQuickGO ontologyBLASTP
42944441911248hypothetical proteinBLASTP
44318460331716sulfataseQuickGO ontologyBLASTP
46196473621167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
4742448323900transcriptional activator NhaRQuickGO ontologyBLASTP