Pre_GI Gene

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Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:4430621 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44306214431010390hypothetical proteinBLASTP
44310074431573567hypothetical proteinBLASTP
443157044326401071rhizopine catabolism proteinQuickGO ontologyBLASTP
44330644433990927LysR family transcriptional regulatorQuickGO ontologyBLASTP
44339964434568573hypothetical proteinBLASTP
44347394435215477hypothetical proteinBLASTP
44352564435399144transcriptional regulatorQuickGO ontologyBLASTP
443542144369261506response regulatorQuickGO ontologyBLASTP
44370264437886861histidine kinaseresponse regulator hybrid proteinQuickGO ontologyBLASTP
44386034439310708avirulence proteinQuickGO ontologyBLASTP
44398704440163294ISxac3 transposaseQuickGO ontologyBLASTP
44401814441035855ISxac3 transposaseQuickGO ontologyBLASTP
4441155444123076tRNA-MetQuickGO ontologyBLASTP
44415154441706192hypothetical proteinBLASTP
444201544438891875RNA polymerase sigma factor RpoDQuickGO ontologyBLASTP
44439974444437441D-tyrosyl-tRNA deacylaseQuickGO ontologyBLASTP
44445374445451915lipid A biosynthesis lauroyl acyltransferaseQuickGO ontologyBLASTP
44455914446112522phosphinothricin acetyltransferaseQuickGO ontologyBLASTP
444635844474911134GTP cyclohydrolaseQuickGO ontologyBLASTP
44476314448107477hypothetical proteinBLASTP
444810444496061503hypothetical proteinBLASTP