Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:3177324 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31767193177327609ECF family RNA polymerase sigma factorQuickGO ontologyBLASTP
317732431784151092putative secreted proteinQuickGO ontology
317864531808342190LacI family transcription regulatorQuickGO ontologyBLASTP
31809293181384456LysR family transcriptional regulatorQuickGO ontologyBLASTP
31816833182042360putative oxidoreductaseQuickGO ontologyBLASTP
31820243182932909hypothetical proteinBLASTP
318313631847161581putative secreted proteinQuickGO ontologyBLASTP
318486431861111248hypothetical protein
318630531876361332putative peroxidaseQuickGO ontologyBLASTP
31877523188210459hypothetical proteinBLASTP
31890383189469432hypothetical protein
318958831908921305ammonium transporterQuickGO ontologyBLASTP
319110031927521653hypothetical proteinBLASTP
319305631954012346glycogen debranching proteinQuickGO ontologyBLASTP
319600031973041305protein kinaseQuickGO ontologyBLASTP