Pre_GI Gene

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Host: NC_011184 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011184:597496 Vibrio fischeri MJ11 chromosome I, complete sequence

Host Lineage: Aliivibrio fischeri; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from a pinecone fish, Monocentris japonica, light-emitting organs in Japan. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This organism is found in marine environments and was originally named by Bernard Fischer during a sea voyage in the 1800s. It is a symbiont in fish and squids and is responsible for light generation in those organisms, which use it as a defense mechanism to avoid predators.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5974965986741179P-proteinQuickGO ontologyBLASTP
598790599143354ribosomal subunit interface proteinQuickGO ontologyBLASTP
599583600308726competence lipoprotein ComLQuickGO ontologyBLASTP
600470601444975ribosomal large subunit pseudouridine synthase DQuickGO ontologyBLASTP
601447602181735hypothetical proteinBLASTP
6022876048722586ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
6102536103681165S ribosomal RNAQuickGO ontologyBLASTP
61043661051277tRNA-AspQuickGO ontologyBLASTP
61054961062577tRNA-TrpQuickGO ontologyBLASTP
611191611664474fimbrial protein pilinQuickGO ontology
611768612268501Tfp pilus assembly protein FimTQuickGO ontologyBLASTP
612249612848600prepilin-type N- cleavagemethylation domain proteinQuickGO ontologyBLASTP
6128456140591215hypothetical proteinBLASTP
614049614477429Tfp pilus assembly protein PilVQuickGO ontologyBLASTP
6145146156651152chromate transport proteinQuickGO ontologyBLASTP
615775616707933transcriptional regulator LysR familyQuickGO ontologyBLASTP
616726616914189hypothetical proteinBLASTP
61702761805810322345-tetrahydropyridine-26-dicarboxylate N-succinyltransferaseQuickGO ontologyBLASTP
618276618566291DNA damage-inducible gene in SOS regulon dependent on cyclic AMP and H-NSQuickGO ontologyBLASTP
618758619393636alternative oxidase 2QuickGO ontologyBLASTP
619422620300879transcriptional regulator LysR familyQuickGO ontologyBLASTP
620436621425990tellurite resistance proteinQuickGO ontologyBLASTP
6215076249263420exodeoxyribonuclease V gamma subunitQuickGO ontologyBLASTP