Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:338121 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
337480338223744Tail assembly proteinQuickGO ontologyBLASTP
338121338792672Tail assembly protein IQuickGO ontologyBLASTP
3388533422663414phage-related protein tail componentQuickGO ontologyBLASTP
342337342936600enterobacterial AilLom family proteinQuickGO ontologyBLASTP
3429903443121323tail fiber proteinQuickGO ontologyBLASTP
344689345267579hypothetical proteinBLASTP
345587345904318PotBQuickGO ontologyBLASTP
346007346633627PotBQuickGO ontologyBLASTP
346816347406591chaperone proteinQuickGO ontologyBLASTP
347651347782132Tail fiber assembly proteinQuickGO ontologyBLASTP
348095348235141integrase for prophage CP-933RQuickGO ontologyBLASTP
348406349386981NleBQuickGO ontologyBLASTP
349463349741279hypothetical proteinBLASTP
3517443529761233Integrase for prophage CP-933IQuickGO ontologyBLASTP
353986354444459hypothetical proteinBLASTP
355101355622522hypothetical proteinBLASTP
355690356256567hypothetical proteinBLASTP
356666356938273activator encoded in prophage CP-933IQuickGO ontologyBLASTP
356944357495552polarity suppression protein encoded in CP-933IQuickGO ontologyBLASTP
357492358244753capsid morphogenesis protein encoded in CP-933IQuickGO ontologyBLASTP
358632358802171hypothetical proteinBLASTP
359163359423261phage DNA binding proteinQuickGO ontologyBLASTP
359420359977558CI repressorQuickGO ontologyBLASTP
359974360195222hypothetical proteinBLASTP
360195360518324hypothetical proteinBLASTP
3604753628652391Alpha replication protein of prophage CP-933IQuickGO ontologyBLASTP
362998363954957hypothetical proteinBLASTP
364629365528900LysR family transcriptional regulatorQuickGO ontologyBLASTP
365627366349723Clavaldehyde dehydrogenaseQuickGO ontologyBLASTP
366515366793279hypothetical proteinBLASTP
367068367217150hypothetical proteinBLASTP