Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:25762 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2511625802687chaperone protein FimCQuickGO ontologyBLASTP
25762284282667outer membrane usher protein FimDQuickGO ontologyBLASTP
28429294361008mannose binding protein FimHQuickGO ontologyBLASTP
2946729982516fimbrial proteinQuickGO ontologyBLASTP
2999830516519fimbrial proteinQuickGO ontologyBLASTP
3047631213738fimbrial chaperoneQuickGO ontologyBLASTP
3127832123846hypothetical proteinBLASTP
3216232449288hypothetical proteinBLASTP
3254932998450hypothetical proteinBLASTP
33368343721005transcriptional regulatorQuickGO ontologyBLASTP
3438034817438transcriptional regulatorQuickGO ontologyBLASTP
3482934975147hypothetical proteinBLASTP
35340370581719arylsulfotransferaseQuickGO ontologyBLASTP
371043867515725-nucleotidaseQuickGO ontologyBLASTP
3877439535762outer membraneexported proteinQuickGO ontologyBLASTP
3984340028186hypothetical protein
40130416231494sulfataseQuickGO ontologyBLASTP
41722429121191chondroitin sulfateheparin utilization regulation proteinQuickGO ontologyBLASTP
42937441841248hypothetical proteinBLASTP
44311460261716arylsulfotransferaseQuickGO ontologyBLASTP
46189473551167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
4741748316900transcriptional activator NhaRQuickGO ontologyBLASTP