Pre_GI Gene

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Host: NC_017986 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:5467279 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
54672795467533255glutaredoxin 3QuickGO ontologyBLASTP
54675475468065519alkylhydroperoxidaseQuickGO ontologyBLASTP
54681955469016822AraC family transcriptional regulatorQuickGO ontologyBLASTP
54690795469957879LysR family transcriptional regulatorQuickGO ontologyBLASTP
547006554710661002alcohol dehydrogenaseQuickGO ontologyBLASTP
54710855471300216hypothetical proteinBLASTP
54712975471881585hypothetical proteinBLASTP
54719315472044114Phosphoglycerate mutaseQuickGO ontology
54721145472539426oxidoreductaseQuickGO ontologyBLASTP
54726425473166525short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
54733045473783480MerR family transcriptional regulatorQuickGO ontologyBLASTP
54737995474149351hypothetical proteinBLASTP
547429254755481257NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
54756875475803117hypothetical protein
54761075476715609short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
547704354790822040hypothetical proteinBLASTP
54791895480121933LysR family transcriptional regulatorQuickGO ontologyBLASTP
548018254811299482-dehydropantoate 2-reductaseQuickGO ontologyBLASTP
54811265481524399hypothetical proteinBLASTP
54815215481976456dehydrataseQuickGO ontologyBLASTP
548197354832051233L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
54832025484020819shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
548402554844624383-dehydroquinate dehydrataseQuickGO ontologyBLASTP
548458454859811398major facilitator transporterQuickGO ontologyBLASTP
54863725486629258hypothetical protein
54866835487375693hypothetical proteinBLASTP
54873725487980609RNA polymerase sigma factorQuickGO ontologyBLASTP
54880245488551528hypothetical proteinBLASTP