Pre_GI: BLASTN Hits

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Query: NC_013353:3474077 Escherichia coli O103:H2 str. 12009, complete genome

Start: 3474077, End: 3513395, Length: 39319

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
AP010958:3474077*3474077351339539319Escherichia coli O103:H2 str. 12009 DNA, complete genome033520BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome023450BLASTN svgBLASTP svg
NC_011748:3196173*3196173323284736675Escherichia coli 55989, complete genome023350BLASTN svgBLASTP svg
CU928145:3196173*3196173323284736675Escherichia coli 55989 chromosome, complete genome023350BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome023280BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome023270BLASTN svgBLASTP svg
NC_009801:31757143175714321109935386Escherichia coli E24377A, complete genome023020BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome022670BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome022670BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome022670BLASTN svgBLASTP svg
NC_009800:29959582995958302338427427Escherichia coli HS, complete genome021830BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome021780BLASTN svgBLASTP svg
NC_011751:3285646*3285646333126645621Escherichia coli UMN026 chromosome, complete genome020210BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome020120BLASTN svgBLASTP svg
NC_002695:3702344*3702344374703744694Escherichia coli O157:H7 str. Sakai, complete genome019590BLASTN svgBLASTP svg
NC_002655:3769643*3769643381434344701Escherichia coli O157:H7 EDL933, complete genome019590BLASTN svgBLASTP svg
NC_007384:3151344*3151344317840127058Shigella sonnei Ss046, complete genome013150BLASTN svgBLASTP svg
AP010958:37879913787991381070122711Escherichia coli O103:H2 str. 12009 DNA, complete genome02589BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome02537BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome02535BLASTN svgBLASTP svg
AP010958:17116561711656173552123866Escherichia coli O103:H2 str. 12009 DNA, complete genome02416BLASTN svgBLASTP svg
NC_004631:3030580*3030580304986119282Salmonella enterica subsp. enterica serovar Typhi Ty2, complete02411BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome02220BLASTN svgBLASTP svg
NC_011750:18495611849561187012520565Escherichia coli IAI39 chromosome, complete genome02218BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome02216BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome02212BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome02212BLASTN svgBLASTP svg
NC_011750:527470*52747055213724668Escherichia coli IAI39 chromosome, complete genome02210BLASTN svgBLASTP svg
NC_011750:2585015*2585015261198826974Escherichia coli IAI39 chromosome, complete genome02210BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome02208BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome02208BLASTN svgBLASTP svg
NC_011750:156799*15679917601919221Escherichia coli IAI39 chromosome, complete genome02208BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome02208BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome02208BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome02208BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome02204BLASTN svgBLASTP svg
NC_010660:175200*17520020478429585Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02202BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02169BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome02163BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome02157BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome02147BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome02147BLASTN svgBLASTP svg
NC_007613:15330241533024155939726374Shigella boydii Sb227, complete genome02145BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome02145BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome02145BLASTN svgBLASTP svg
NC_011750:19313841931384195623124848Escherichia coli IAI39 chromosome, complete genome02141BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome02135BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome02131BLASTN svgBLASTP svg
NC_010498:48560114856011487626620256Escherichia coli SMS-3-5, complete genome02129BLASTN svgBLASTP svg
NC_004431:4955658*4955658497950623849Escherichia coli CFT073, complete genome02123BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome02107BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome02087BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome02074BLASTN svgBLASTP svg
NC_010660:864458644510942022976Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02046BLASTN svgBLASTP svg
NC_002695:14179121417912143730119390Escherichia coli O157:H7 str. Sakai, complete genome02026BLASTN svgBLASTP svg
NC_002655:11039911103991112782323833Escherichia coli O157:H7 EDL933, complete genome02022BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome01992BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome01978BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome01974BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome01972BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome01972BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome01895BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome01836BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome01758BLASTN svgBLASTP svg
NC_011750:91995391995393907219120Escherichia coli IAI39 chromosome, complete genome01352BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome01294BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence01289BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome01289BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence01183BLASTN svgBLASTP svg
NC_011748:3360967*3360967340151440548Escherichia coli 55989, complete genome01172BLASTN svgBLASTP svg
CU928145:3360967*3360967340151440548Escherichia coli 55989 chromosome, complete genome01172BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome01031BLASTN svgBLASTP svg
NC_002655:2142587*2142587216371121125Escherichia coli O157:H7 EDL933, complete genome01019BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome0874BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome0827BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome0720BLASTN svgBLASTP svg
NC_003198:3042000*3042000306436622367Salmonella enterica subsp. enterica serovar Typhi str. CT18,0716BLASTN svgBLASTP svg
NC_007608:970929709212311926028Shigella boydii Sb227 plasmid pSB4_227, complete sequence0686BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence2e-144521BLASTN svgBLASTP svg
NC_011083:3171171*3171171319192520755Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-109404BLASTN svgBLASTP svg
NC_015663:2807574*2807574283616128588Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-105391BLASTN svgBLASTP svg
CP002797:4812799*4812799483159918801Escherichia coli NA114, complete genome6e-104387BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome8e-91343BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome5e-83317BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome3e-75291BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,4e-68268BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence1e-58236BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome8e-51210BLASTN svgBLASTP svg
NC_013956:66329566329568566022366Pantoea ananatis LMG 20103 chromosome, complete genome2e-45192BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome1e-43186BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete7e-42180BLASTN svgBLASTP svg
NC_020181:4800298*4800298483905538758Enterobacter aerogenes EA1509E, complete genome7e-36161BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence4e-34155BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome1e-31147BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome1e-31147BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome1e-31147BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome1e-31147BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome6e-21111BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome3e-19105BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome1e-18103BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome1e-18103BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-18103BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013508:18628961862896188607023175Edwardsiella tarda EIB202, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1799.6BLASTN svgBLASTP svg
NC_013520:718732*71873273509916368Veillonella parvula DSM 2008, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_004460:97373897373899864424907Vibrio vulnificus CMCP6 chromosome II, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_019897:26965872696587272049823912Thermobacillus composti KWC4 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_009832:19464011946401197178325383Serratia proteamaculans 568, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015424:2357600*2357600239563038031Aeromonas veronii B565 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,8e-1177.8BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007712:26499402649940266759917660Sodalis glossinidius str. 'morsitans', complete genome5e-0971.9BLASTN svgBLASTP svg
NC_006526:12020001202000121991217913Zymomonas mobilis subsp. mobilis ZM4, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_005139:51876051876053705318294Vibrio vulnificus YJ016 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_013508:876431*87643191551339083Edwardsiella tarda EIB202, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020911:2921925*2921925299019968275Octadecabacter antarcticus 307, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012214:2221702*2221702227363551934Erwinia pyrifoliae Ep1/96, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010644:1540249*1540249155929819050Elusimicrobium minutum Pei191, complete genome5e-0661.9BLASTN svgBLASTP svg