Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:4817864 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48178644818754891putative transposase OrfB protein of insertion sequence IS629QuickGO ontologyBLASTP
48187514819077327putative transposase OrfA protein of insertion sequence IS629QuickGO ontologyBLASTP
48192114819429219hypothetical protein
481943748207291293putative aminotransferaseQuickGO ontologyBLASTP
482067448219121239putative NaH antiporterQuickGO ontologyBLASTP
48219224822704783putative transposaseQuickGO ontologyBLASTP
482270148237231023putative transposaseQuickGO ontologyBLASTP
48237764824132357putative NaH antiporterQuickGO ontologyBLASTP
48247564824935180putative transposaseQuickGO ontologyBLASTP
48249324825411480hypothetical proteinBLASTP
48254464826324879hypothetical proteinBLASTP
48266524827383732hypothetical proteinBLASTP
48274274827621195hypothetical protein
48278054828041237hypothetical proteinBLASTP
482886648300891224hypothetical proteinBLASTP
48301904831074885hypothetical proteinBLASTP
48312774831957681hypothetical proteinBLASTP
48320004832782783hypothetical proteinBLASTP
48331114833929819hypothetical proteinBLASTP
48340624834505444hypothetical proteinBLASTP
48345204834996477putative DNA repair proteinQuickGO ontologyBLASTP
48350834835304222hypothetical protein YeeTQuickGO ontologyBLASTP
48353844835752369hypothetical protein YeeUQuickGO ontologyBLASTP
48358424836219378hypothetical proteinBLASTP
48362704836704435hypothetical proteinBLASTP
48366714836913243hypothetical proteinBLASTP
48369924837150159hypothetical proteinBLASTP
48371694837606438hypothetical proteinBLASTP
483809048401382049hypothetical proteinBLASTP
48405374840716180hypothetical proteinBLASTP
48407614841633873hypothetical proteinBLASTP
48418454842825981hypothetical proteinBLASTP
484289048439961107hypothetical protein YjhT precursorQuickGO ontologyBLASTP
48440164844732717hypothetical protein YjhA precursorQuickGO ontologyBLASTP
48455294845807279hypothetical proteinBLASTP
48461964846798603type 1 fimbriae regulatory protein FimBQuickGO ontologyBLASTP
48472764847872597type 1 fimbriae regulatory protein FimEQuickGO ontologyBLASTP
48479514848166216hypothetical proteinBLASTP
48483534848901549type-1 fimbrial major subunitQuickGO ontologyBLASTP
48488674849505639fimbrin-like protein fimI precursorQuickGO ontologyBLASTP
48496114850267657chaperone protein FimC precursorQuickGO ontologyBLASTP
485033348529692637outer membrane usher protein FimD precursorQuickGO ontologyBLASTP
48529794853509531FimF protein precursorQuickGO ontologyBLASTP
48535224854025504FimG protein precursorQuickGO ontologyBLASTP
48540364854947912FimH protein precursorQuickGO ontologyBLASTP
48552574855391135hypothetical protein
48554944855649156hypothetical protein
485567648568601185mannonate dehydrataseQuickGO ontologyBLASTP
485694148584011461D-mannonate oxidoreductaseQuickGO ontologyBLASTP
48586164859389774uxu operon transcriptional regulatorQuickGO ontologyBLASTP
48598034860186384hypothetical protein YjiDQuickGO ontologyBLASTP
48602344860575342hypothetical proteinBLASTP
48606124861568957putative HTH-type transcriptional regulator YjiEQuickGO ontologyBLASTP
486158848627601173Isoaspartyl dipeptidaseQuickGO ontologyBLASTP