Pre_GI Gene

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Host: NC_005139 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005139:518760 Vibrio vulnificus YJ016 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5187605211502391hypothetical proteinBLASTP
5211505235702421hypothetical proteinBLASTP
523603524544942hypothetical proteinBLASTP
525048525866819transcriptional regulator of sugar metabolismQuickGO ontologyBLASTP
525878526366489phosphotransferase system mannosefructoseN-acetylgalactosamine-specific component IIBQuickGO ontologyBLASTP
526385527158774phosphotransferase system mannosefructoseN-acetylgalactosamine-specific component IICQuickGO ontologyBLASTP
527148528032885phosphotransferase system mannosefructoseN-acetylgalactosamine-specific component IIDQuickGO ontologyBLASTP
528045528485441phosphotransferase system mannosefructose-specific component IIAQuickGO ontologyBLASTP
5286655297051041hypothetical proteinBLASTP
529773530495723endoxylanase precursorQuickGO ontology
530553531194642hypothetical proteinBLASTP
5312915327781488hypothetical proteinBLASTP
532848533078231putative transposaseQuickGO ontologyBLASTP
533252534139888putative transposaseQuickGO ontologyBLASTP
534147534305159hypothetical protein
534289534801513hypothetical proteinBLASTP
534852535229378hypothetical proteinBLASTP
535254536063810transcriptional regulatorQuickGO ontologyBLASTP
536143536289147hypothetical protein
5362925370537622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP