Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:2278306 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22783062279298993IS5 transposaseQuickGO ontologyBLASTP
22797462280636891IS629 transposase orfBQuickGO ontologyBLASTP
22806332280959327IS629 transposase orfAQuickGO ontologyBLASTP
22820782283001924IS903 transposaseQuickGO ontologyBLASTP
228304822842081161glycosyl transferase group 2QuickGO ontologyBLASTP
228433022854631134glycosyl transferase group 1 family proteinQuickGO ontologyBLASTP
22854762286366891glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
228636322875171155UDP-galactopyranose mutaseQuickGO ontologyBLASTP
228753622894281893glycosyl transferase family proteinQuickGO ontologyBLASTP
22894432290183741O-antigen export system ATP-binding protein RfbBQuickGO ontologyBLASTP
22901832290962780O-antigen export system permease protein RfbAQuickGO ontologyBLASTP
22917132291850138hypothetical protein
22921972292328132hypothetical protein
22924082292560153hypothetical protein
229258622942051620ISL3 family transposaseQuickGO ontologyBLASTP
22959502296513564hypothetical proteinBLASTP
229772322995461824hypothetical proteinBLASTP
229991123014761566hypothetical proteinBLASTP