Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:1931384 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19313841932274891transposase ORF B IS629QuickGO ontologyBLASTP
19322711932597327transposase ORF A IS629QuickGO ontologyBLASTP
19326031933256654hypothetical proteinBLASTP
19332661933547282hypothetical proteinBLASTP
193354419359492406putative prophage side tail fiber proteinQuickGO ontologyBLASTP
19360081936607600putative Lom-like outer membrane protein of prophageQuickGO ontologyBLASTP
193667519404753801Host specificity protein JQuickGO ontologyBLASTP
19408191941499681tail assembly protein IQuickGO ontologyBLASTP
19413971942140744tail assembly protein KQuickGO ontologyBLASTP
19421461942844699minor tail protein LQuickGO ontologyBLASTP
19428441943173330minor tail protein MQuickGO ontologyBLASTP
194317019457312562minor tail protein HQuickGO ontologyBLASTP
19457121946125414minor tail protein TQuickGO ontologyBLASTP
19461521946583432minor tail protein GQuickGO ontologyBLASTP
19466021947348747major tail protein VQuickGO ontologyBLASTP
19473561947751396minor tail protein UQuickGO ontologyBLASTP
19477481948281534minor tail protein Z GpZQuickGO ontologyBLASTP
19482971948650354tail attachment proteinQuickGO ontologyBLASTP
19486431949074432hypothetical proteinBLASTP
194907819501061029major head proteinQuickGO ontologyBLASTP
19501641950511348head decoration protein gpD major capsid protein DQuickGO ontologyBLASTP
195054819520531506head-tail preconnector protein GP5QuickGO ontologyBLASTP
195204319536351593head protein Gp4QuickGO ontologyBLASTP
19536321953838207head stabilization protein head protein GP3QuickGO ontologyBLASTP
195382219557501929terminase large subunit Gp2QuickGO ontologyBLASTP
19557221956231510putative terminase small subunit DNA packaging protein Nu1 from bacteriophage originQuickGO ontologyBLASTP