Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:3042000 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30421983042956759hypothetical proteinBLASTP
30429433043455513hypothetical proteinBLASTP
304360030446761077hypothetical proteinBLASTP
30446733045416744probable fimbrial chaperone proteinQuickGO ontologyBLASTP
304545730479462490probable outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
30480663048647582probable fimbrial proteinQuickGO ontologyBLASTP
30493663049965600hypothetical proteinBLASTP
30500453050581537outer membrane protein associated with virulenceQuickGO ontologyBLASTP
30513883051786399hypothetical protein assiciated with virulenceQuickGO ontologyBLASTP
30517863052013228hypothetical protein assiciated with virulenceQuickGO ontologyBLASTP
30521903052441252endonuclease fragmentQuickGO ontologyBLASTP
30527223053522801hypothetical proteinBLASTP
30540943055077984hypothetical proteinBLASTP
30551533055644492hypothetical proteinBLASTP
30563523057005654hypothetical protein
30575503058080531hypothetical proteinBLASTP
305816330598091647possible integraseQuickGO ontologyBLASTP
3059944306001774tRNA-GlyQuickGO ontologyBLASTP
30600973060849753possible lipoproteinQuickGO ontologyBLASTP
30611203061665546isopentenyl-diphosphate delta-isomeraseQuickGO ontologyBLASTP
306174130632581518lysyl-tRNA synthetaseQuickGO ontologyBLASTP
306326830643661099peptide chain release factor 2QuickGO ontology