Pre_GI: BLASTP Hits

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Query: NC_003198:3042000:3057550 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3057550, End: 3058080, Length: 531

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3867558:390116339011633901687525Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-75281
NC_013716:5201097:520910352091035209732630Citrobacter rodentium ICC168, complete genomehypothetical protein2e-73274
NC_013353:3474077:350420935042093504838630Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein9e-73272
AP010958:3474077:350420935042093504838630Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein9e-73272
NC_011283:785973:794134794134794766633Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-70263
NC_020908:2788852:280604628060462806777732Octadecabacter arcticus 238, complete genomehypothetical protein3e-41167
NC_020209:3262000:328315832831583283607450Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-37152
NC_019940:3863124:386897238689723869715744Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein5e-30130
NC_014033:2080818:209313420931342093718585Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-29129
NC_013923:363500:113871138712028642Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequencehypothetical protein3e-26117
NC_016628:1:195195518324Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein1e-24112
NC_008787:685401:706872706872707465594Campylobacter jejuni subsp. jejuni 81-176, complete genomehypothetical protein2e-21102
NC_010337:1999405:200886320088632009528666Heliobacterium modesticaldum Ice1, complete genomehypothetical protein8e-1063.2