Pre_GI: BLASTP Hits

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Query: NC_003198:3042000:3054094 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3054094, End: 3055077, Length: 984

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3867558:389491338949133895902990Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-180631
NC_011283:785973:7973997973997985381140Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-29129
NC_016832:3020000:3028702302870230298231122Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-24112
NC_004631:3030580:3040062304006230411831122Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-24112
NC_012660:1579204:1609454160945416104971044Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein6e-2098.6
NC_012583:440420:465692465692466636945Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-1478.2
NC_009456:787322:797306797306798250945Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein8e-1478.2