Pre_GI Gene

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Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:1211000 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1211152121122877tRNA-ArgQuickGO ontology
12115071211965459Putative TransposaseQuickGO ontologyBLASTP
12119771212342366hypothetical proteinBLASTP
12125041213394891Putative Transposase for IS629QuickGO ontologyBLASTP
12133911213717327Unknown protein of IS629 encoded within prophageQuickGO ontologyBLASTP
12137431214183441hypothetical proteinBLASTP
121452912164991971Outer membrane hemehemoglobin receptorQuickGO ontologyBLASTP
12165181217309792hypothetical proteinBLASTP
121751012187721263hypothetical proteinBLASTP
12188791219061183hypothetical proteinBLASTP
121972312208591137hypothetical proteinBLASTP
12208951221437543hypothetical proteinBLASTP
12238111224107297hypothetical proteinBLASTP
12244071225279873Hypothetical protein yeePQuickGO ontologyBLASTP
122545412287293276Antigen 43 precursorQuickGO ontologyBLASTP
122884412313662523Hypothetical protein yeeRQuickGO ontologyBLASTP
12314421231897456hypothetical proteinBLASTP
12319151232043129hypothetical proteinBLASTP
12320161232204189hypothetical proteinBLASTP
12323081233129822Hypothetical protein yafZQuickGO ontologyBLASTP
12323141233222909hypothetical proteinBLASTP