Pre_GI Gene

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Host: NC_008782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008782:2062962 Acidovorax sp. JS42, complete genome

Host Lineage: Acidovorax; Acidovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Acidovorax sp. JS42, formerly Pseudomonas sp. JS42, was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
206155620629651410hypothetical proteinBLASTP
206296220661563195DNA polymerase III alpha subunitQuickGO ontologyBLASTP
206622020674731254Sel1 domain protein repeat-containing proteinQuickGO ontology
206750920692541746hypothetical proteinBLASTP
20693492069768420hypothetical protein
20698352070425591hypothetical protein
207367920750071329transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
207537920772321854phage integrase family proteinQuickGO ontologyBLASTP
207771320792031491succinic semialdehyde dehydrogenaseQuickGO ontologyBLASTP
207934820819722625alanyl-tRNA synthetaseQuickGO ontologyBLASTP
208212020831241005diguanylate cyclaseQuickGO ontologyBLASTP
20831452083900756tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
20838972084868972Glutamate--tRNA ligaseQuickGO ontologyBLASTP
208486520859681104FAD dependent oxidoreductaseQuickGO ontologyBLASTP
20860652087003939transcriptional regulator LysR familyQuickGO ontologyBLASTP