Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:2585015 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
258501525862621248hypothetical proteinBLASTP
25864412587196756putative lipoproteinQuickGO ontologyBLASTP
25874902588422933hypothetical proteinBLASTP
2588498258857275tRNA-ArgQuickGO ontology
258873425898911158putative prophage CPS-53 integrase CPS-53 KpLE1 prophageQuickGO ontologyBLASTP
25904262590752327transposase ORF A IS629QuickGO ontologyBLASTP
25907492591639891transposase ORF B IS629QuickGO ontologyBLASTP
259167925951793501outer membrane autotransporter domain-containing protein fragmentQuickGO ontologyBLASTP
25961422596771630Type 1 fimbriae regulatory protein fimBQuickGO ontologyBLASTP
25975202598089570Type 1 fimbriae regulatory protein fimBQuickGO ontologyBLASTP
25984842599437954DNA-binding transcriptional regulator DsdCQuickGO ontologyBLASTP
259964926009861338permease DsdXQuickGO ontologyBLASTP
260100426023351332D-serine dehydrataseQuickGO ontologyBLASTP
260244026039781539putative multidrug efflux systemQuickGO ontologyBLASTP
260397826051411164EmrKY-TolC multidrug resistance efflux pump membrane fusion protein componentQuickGO ontologyBLASTP
26055572606171615DNA-binding transcriptional activator EvgAQuickGO ontologyBLASTP
260617626097693594hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP
260982526109701146hypothetical proteinBLASTP
26110442611988945putative transporter YfdVQuickGO ontologyBLASTP