Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:3669500 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36696783670496819hypothetical proteinBLASTP
36705873671072486hypothetical proteinBLASTP
36710873671563477putative radC-like protein YeeSQuickGO ontologyBLASTP
36716323671853222hypothetical proteinBLASTP
36719283672302375hypothetical proteinBLASTP
36723493672726378hypothetical proteinBLASTP
36727233673211489hypothetical proteinBLASTP
36732233673420198hypothetical proteinBLASTP
36735053674347843hypothetical proteinBLASTP
36752143675492279T3SS secreted effector EspO-homologQuickGO ontologyBLASTP
367555036769141365T3SS secreted effector EspK-homologQuickGO ontologyBLASTP
36772063677844639T3SS secreted effector NleG-homologQuickGO ontologyBLASTP
36780423678626585T3SS secreted effector EspM-homologQuickGO ontologyBLASTP
36788713679755885T3SS secreted effector EspFQuickGO ontologyBLASTP
36799713680249279T3SS componentQuickGO ontologyBLASTP
36802553680476222T3SS structure protein EscFQuickGO ontologyBLASTP
36805133680920408chaperone CesD2QuickGO ontologyBLASTP
36809273681871945translocon EspBQuickGO ontologyBLASTP
368189236830341143translocon EspDQuickGO ontologyBLASTP
36830473683625579translocon EspAQuickGO ontologyBLASTP
368368336847381056secretion switching protein SepLQuickGO ontologyBLASTP
368488136861011221T3SS structure protein EscDQuickGO ontologyBLASTP
368637536892212847intimin epsilonQuickGO ontologyBLASTP
36892823689752471chaperone CesTQuickGO ontologyBLASTP
368988536915011617translocated intimin receptor TirQuickGO ontologyBLASTP
36919483692559612T3SS secreted effector MapQuickGO ontologyBLASTP
36928103693169360chaperone CesFQuickGO ontologyBLASTP
36933883693903516T3SS secreted effector EspHQuickGO ontologyBLASTP
36939343694851918T3SS structure protein SepQQuickGO ontologyBLASTP
36948143695230417T3SS componentQuickGO ontologyBLASTP
36952233695600378T3SS componentQuickGO ontologyBLASTP
369560336969431341translocator EscNQuickGO ontologyBLASTP
369692736989542028translocator EscVQuickGO ontologyBLASTP
36989513699304354regulator MpcQuickGO ontologyBLASTP
36994883699784297T3SS secreted effector EspZQuickGO ontologyBLASTP
36998173700245429predicted T3SS componentQuickGO ontologyBLASTP
37002473700819573T3SS structure protein EscJQuickGO ontologyBLASTP
37008253701280456secretion switching protein SepDQuickGO ontologyBLASTP
370128037028181539T3SS structure protein EscCQuickGO ontologyBLASTP
37028323703287456chaperone CesDQuickGO ontologyBLASTP
37036733704086414positive regulator GrlAQuickGO ontologyBLASTP
37041623704518357negative regulator GrlRQuickGO ontologyBLASTP
37047153705173459hypothetical proteinBLASTP
370517037062071038T3SS structure protein EscUQuickGO ontologyBLASTP
37062003706976777T3SS structure protein EscTQuickGO ontologyBLASTP
37069763707245270T3SS structure protein EscSQuickGO ontologyBLASTP
37072453707898654T3SS structure protein EscRQuickGO ontologyBLASTP
37079033708598696T3SS componentQuickGO ontologyBLASTP
37085433709142600T3SS componentQuickGO ontologyBLASTP
37091393709453315T3SS componentQuickGO ontologyBLASTP
37094663709684219T3SS componentQuickGO ontologyBLASTP
37096993710088390transcription regulator LerQuickGO ontologyBLASTP
371122837124241197T3SS secreted effector EspGQuickGO ontologyBLASTP
37125713713389819T3SS componentQuickGO ontologyBLASTP
37135953714470876T3SS secreted effector OspB-homologQuickGO ontologyBLASTP
37151193715466348predicted IS602 transposase OrfAQuickGO ontologyBLASTP
37155863716332747predicted IS602 transposase OrfBQuickGO ontologyBLASTP
371639337175231131BLASTP
37175933718480888putative IS629 transposase OrfBQuickGO ontologyBLASTP
37184803718806327putative IS629 transposase OrfAQuickGO ontologyBLASTP
371885837211252268BLASTP
37212313721557327putative IS629 transposase OrfAQuickGO ontologyBLASTP
37215573722444888putative IS629 transposase OrfBQuickGO ontologyBLASTP
372248437235811098BLASTP
372406637257481683glycolate transporterQuickGO ontologyBLASTP
37258273726048222
372610337282742172malate synthase GQuickGO ontologyBLASTP