Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:156799 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
156799157731933putative transposaseQuickGO ontologyBLASTP
158091158942852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1589541597487953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
160377160703327transposase ORF A IS629QuickGO ontologyBLASTP
160700161590891transposase ORF B IS629QuickGO ontologyBLASTP
162479163075597putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
163102163707606putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
163719164261543putative fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
1644081669032496putative outer membrane usher proteinQuickGO ontologyBLASTP
166938167678741putative chaperone protein EcpDQuickGO ontologyBLASTP
167783168367585putative fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
1687381692174802-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1692141706321419polyA polymerase IQuickGO ontologyBLASTP
170671171597927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
171634172089456RNA polymerase-binding transcription factorQuickGO ontologyBLASTP
172267172971705sugar fermentation stimulation protein AQuickGO ontologyBLASTP
1729861735165312-5 RNA ligaseQuickGO ontologyBLASTP
1735901760192430ATP-dependent RNA helicase HrpBQuickGO ontologyBLASTP