Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:3171171 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
317117131736602490fimbrial usher proteinQuickGO ontologyBLASTP
31737803174361582probable fimbrial proteinQuickGO ontologyBLASTP
31750803175712633YfdX proteinQuickGO ontologyBLASTP
31757593176295537outer membrane proteinQuickGO ontologyBLASTP
31763413176526186hypothetical proteinBLASTP
317690531774655613-hexulose-6-phosphate isomeraseQuickGO ontologyBLASTP
317748031782327533-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
31783553178999645ribulose-phosphate 3-epimeraseQuickGO ontologyBLASTP
317901831802711254PTS system galactitol-specific IIC componentQuickGO ontologyBLASTP
31802993180472174PTS system galactitol-specific enzyme II B componentQuickGO ontologyBLASTP
31806143181093480galactitol-specific phosphotransferase enzyme iia componentQuickGO ontologyBLASTP
31814123182167756transcriptional regulator DeoR familyQuickGO ontologyBLASTP
31825503183086537ribose-5-phosphate isomerase BQuickGO ontologyBLASTP
318309031844601371galacitol pts eiicQuickGO ontologyBLASTP
31844823184766285phosphotransferase system lactosecellobiose-specific IIB subunitQuickGO ontologyBLASTP
31847743185232459pts system mannitol-specific eiicba componentQuickGO ontologyBLASTP
31854063186371966putative transcriptional regulator DeoR familyQuickGO ontologyBLASTP
31865853186758174arsenate reductaseQuickGO ontologyBLASTP
31868383187260423arsenical resistance operon repressorQuickGO ontologyBLASTP
318734331884461104site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
3188610318868576tRNA-GlyQuickGO ontologyBLASTP
31887643189516753YgeRQuickGO ontologyBLASTP
31896023189736135hypothetical protein
31897873190332546isopentenyl-diphosphate delta-isomeraseQuickGO ontologyBLASTP
319040831919251518lysyl-tRNA synthetase LysSQuickGO ontologyBLASTP