Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:5045927 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50459275046652726putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
50466645047287624DNA-binding transcriptional activator BglJQuickGO ontologyBLASTP
50473255048113789ferric iron reductase involved in ferric hydroximate transportQuickGO ontologyBLASTP
50481435048490348hypothetical proteinBLASTP
5048529504861587tRNA-LeuQuickGO ontologyBLASTP
5048650504873687tRNA-LeuQuickGO ontologyBLASTP
5048765504885187tRNA-LeuQuickGO ontologyBLASTP
50490515050082103216S ribosomal RNA m2G1207 methyltransferaseQuickGO ontologyBLASTP
50501855050598414DNA polymerase III subunit psiQuickGO ontologyBLASTP
50505675051013447ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
50510285051705678nucleotidaseQuickGO ontologyBLASTP
505209150533141224putative integraseQuickGO ontologyBLASTP
505348750547401254hypothetical proteinBLASTP
50552175055564348hypothetical proteinBLASTP
50555615056439879putative phosphoadenosine phosphosulfate reductase from phage originQuickGO ontologyBLASTP
50564615057018558hypothetical proteinBLASTP
50570845057908825hypothetical proteinBLASTP
50579745058522549hypothetical proteinBLASTP
50590825059756675repressor protein phage e14 e14 prophageQuickGO ontologyBLASTP
50598475060047201putative DNA-binding transcriptional regulator e14 prophageQuickGO ontologyBLASTP
50603095060635327transposase ORF A IS629QuickGO ontologyBLASTP
50606325061522891transposase ORF B IS629QuickGO ontologyBLASTP
50619525062788837Immunity region from phageQuickGO ontologyBLASTP
50627815063017237hypothetical proteinBLASTP
50630145063832819putative replication protein from phageQuickGO ontologyBLASTP
50642905064976687putative phage AdoMet-dependent methyltransferaseQuickGO ontologyBLASTP
50649735065299327putative LexA repressorQuickGO ontologyBLASTP
50652965065685390Crossover junction endodeoxyribonucleaseQuickGO ontologyBLASTP
50657055066514810putative KilA protein KilA-N domainQuickGO ontologyBLASTP
50665165067511996hypothetical proteinBLASTP
50675255068277753putative antitermination protein Q Qin prophageQuickGO ontologyBLASTP