Pre_GI Gene

Some Help

Host: NC_007414 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007414:56508 Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (substrain) is considered a reference strain of O157:H7, which was first isolated during an outbreak in 1982. Escherichia coli O157:H7. This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
55347565781232plasmid-partitioning proteinQuickGO ontology
56508576271120plasmid partitioning proteinQuickGO ontology
5793458206273hypothetical protein
5829058586297hypothetical protein
58849605731725hypothetical proteinBLASTP
6065061552903hypothetical proteinBLASTP
6193862621684hypothetical proteinBLASTP
6273763291555hypothetical proteinBLASTP
6333764113777hypothetical proteinBLASTP
6453164956426hypothetical proteinBLASTP
6500365425423hypothetical proteinBLASTP
6558366113531hypothetical proteinBLASTP
6662766887261hypothetical protein
66891682521362hypothetical proteinBLASTP
6829968862564hypothetical proteinBLASTP
6894869403456hypothetical proteinBLASTP
6966670157492single-stranded DNA-binding proteinQuickGO ontologyBLASTP
7018770447261hypothetical proteinBLASTP
70453724712019hypothetical proteinBLASTP
7252372960438putative regulator of SOS inductionQuickGO ontologyBLASTP
7295773718762hypothetical proteinBLASTP
7389274104213hypothetical proteinBLASTP
7395074108159stable plasmid inheritance proteinQuickGO ontologyBLASTP
74290762631974putative nickaseQuickGO ontologyBLASTP
7633176762432hypothetical proteinBLASTP
7732277681360putative transposaseQuickGO ontologyBLASTP
7786378273411transposaseQuickGO ontologyBLASTP
78542880519510putative cytotoxinQuickGO ontologyBLASTP
8814388415273putative transposaseQuickGO ontologyBLASTP
8834288845504hypothetical proteinBLASTP
88992902901299DNA helicaseQuickGO ontologyBLASTP
9031091056747F pilin acetylaseQuickGO ontologyBLASTP
9111591975861hypothetical proteinBLASTP