Pre_GI Gene

Some Help

Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:527470 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5274705300792610putative outer membrane export usher proteinQuickGO ontologyBLASTP
530122531099978putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
531201531626426putative fimbrial proteinQuickGO ontologyBLASTP
531629532261633transcriptional regulator FimZQuickGO ontologyBLASTP
53250353257977tRNA-ArgQuickGO ontologyBLASTP
532898533788891transposase ORF B IS629QuickGO ontologyBLASTP
533785534111327transposase ORF A IS629QuickGO ontologyBLASTP
5340735350771005putative integrase of prophageQuickGO ontologyBLASTP
535070535306237putative DNA binding protein from phage originQuickGO ontologyBLASTP
536225537139915hypothetical proteinBLASTP
537132537356225hypothetical proteinBLASTP
537359537646288hypothetical proteinBLASTP
5378265394631638putative DNA primase from prophageQuickGO ontologyBLASTP
539751539996246hypothetical proteinBLASTP
539993540442450putative single-stranded DNA-binding proteinQuickGO ontologyBLASTP
5404865417001215putative major head protein from prophageQuickGO ontologyBLASTP
541710542051342putative head decoration protein from prophageQuickGO ontologyBLASTP
542063542446384hypothetical proteinBLASTP
5430455441871143hypothetical proteinBLASTP
544409545185777major head proteinQuickGO ontologyBLASTP
545188545625438DNA packaging protein from bacteriophage originQuickGO ontologyBLASTP
545637545990354tail attachment protein from bacteriophage originQuickGO ontologyBLASTP
546002546580579minor tail protein Z GpZQuickGO ontologyBLASTP
546577546972396minor tail protein UQuickGO ontologyBLASTP
546950547720771major tail protein VQuickGO ontologyBLASTP
547736548158423minor tail protein GQuickGO ontologyBLASTP
548140548598459minor tail protein TQuickGO ontologyBLASTP
5485675511132547minor tail protein HQuickGO ontologyBLASTP
551110551439330minor tail protein MQuickGO ontologyBLASTP
551439552137699minor tail protein LQuickGO ontologyBLASTP