Pre_GI: BLASTP Hits

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Query: NC_021184:3174500:3200203 Desulfotomaculum gibsoniae DSM 7213, complete genome

Start: 3200203, End: 3200760, Length: 558

Host Lineage: Desulfotomaculum gibsoniae; Desulfotomaculum; Peptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Country: Germany; Environment: Animal intestinal microflora, Fresh water; Isolation: freshwater mud; Temp: Mesophile; Temp: 37C. This organism is a sulfate-reducing spore forming Gram-positive bacterium which grows anaerobically with sulfate and sulfite as electron acceptors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit5e-22103
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor5e-22103
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family5e-21100
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit7e-2097.1
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW2e-1995.1
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W2e-1995.1
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W2e-1995.1
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1995.1
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor2e-1995.1
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1995.1
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-1995.1
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-1994.4
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU7e-1993.6
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1892.8
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW7e-1890.1
NC_021184:1024305:103925110392511039850600Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-1789.4
NC_012659:2715651:273817827381782738756579Bacillus anthracis str. A0248, complete genomeRNA polymerase sigma factor1e-1789.4
NC_005945:2716000:273861327386132739191579Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma-70 factor1e-1789.4
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1789
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1788.6
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE3e-1787.8
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1787.8
NC_009437:2367842:237191723719172372468552Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeRNA polymerase sigma factor SigY4e-1787.8
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor4e-1787.4
NC_015949:1180755:118484711848471185398552Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit7e-1786.7
NC_014652:1032711:107042510704251070976552Caldicellulosiruptor hydrothermalis 108 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily1e-1686.3
NC_014721:1777644:178173617817361782287552Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily1e-1686.3
NC_012034:1783912:178800617880061788557552Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1685.9
NC_003997:2715623:273815027381502738692543Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma-70 factor1e-1685.9
NC_014657:1518721:152332215233221523873552Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily1e-1685.9
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY2e-1685.1
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor7e-1683.6
NC_012491:5914500:591721659172165917788573Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor9e-1683.2
NC_014720:1161841:117795711779571178508552Caldicellulosiruptor kronotskyensis 2002 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily1e-1582.8
NC_015846:369500:389672389672390220549Capnocytophaga canimorsus Cc5 chromosome, complete genomesigma-W factor1e-1582.8
NC_013173:1712138:173775417377541738296543Desulfomicrobium baculatum DSM 4028, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1581.6
NC_015589:2281054:228795522879552288491537Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1581.3
NC_014392:969498:100562310056231006174552Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1580.9
NC_015914:2769042:276844027684402769051612Cyclobacterium marinum DSM 745 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-1580.9
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E8e-1580.1
NC_014206:2912945:291424629142462914827582Geobacillus sp. C56-T3 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1479.3
NC_013411:1587689:160318016031801603761582Geobacillus sp. Y412MC61, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.3
NC_014915:727631:743122743122743703582Geobacillus sp. Y412MC52 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.3
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)1e-1479.3
NC_011894:2747491:276819727681972768877681Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1479
NC_014483:4740214:475311047531104753685576Paenibacillus polymyxa E681 chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein2e-1478.6
NC_004193:3215500:321633632163363216875540Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor3e-1478.2
NC_008536:2961460:296649229664922967064573Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1477
NC_015496:2279829:228225522822552282800546Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1477
NC_012491:4987280:499185249918524992427576Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor7e-1477
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1376.3
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1375.9
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1375.5
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor2e-1375.1
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1374.7
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1374.3
NC_012796:1645856:164776616477661648332567Desulfovibrio magneticus RS-1, complete genomeRNA polymerase ECF-type sigma factor4e-1374.3
NC_014150:1006000:102603910260391026611573Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1373.6
NC_014829:1376253:138816813881681388734567Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1373.2
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1373.2
NC_014330:1957725:196524019652401965806567Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma-24 subunit1e-1272.8
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_016627:2524307:254776425477642548498735Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-1272.8
NC_015061:1481500:149778814977881498369582Rahnella sp. Y9602 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_017047:1434500:145073114507311451312582Rahnella aquatilis HX2 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1272.8
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_014829:4422314:442603644260364426554519Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272.4
NC_017208:5339331:535609453560945356621528Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase sigma factor2e-1272.4
NC_014318:1537732:154374515437451544242498Amycolatopsis mediterranei U32 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1272.4
NC_009925:1184442:118898911889891189603615Acaryochloris marina MBIC11017, complete genomeRNA polymerase sigma-24 subunit2e-1272.4
NC_015160:797780:818328818328818885558Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272.4
NC_019908:1296870:130311113031111303680570Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma-24 subunit1e-1272.4
NC_004459:1794540:181002018100201810580561Vibrio vulnificus CMCP6 chromosome I, complete sequenceRNA polymerase sigma-70 factor2e-1272
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative2e-1272
NC_016627:4270949:428432542843254284810486Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1271.6
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor3e-1271.6
NC_012472:5126186:514219551421955142722528Bacillus cereus 03BB102, complete genomeRNA polymerase sigma-70 factor, ECF subfamily3e-1271.2
NC_016779:5079460:509547950954795096006528Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor3e-1271.2
NC_017243:685783:693812693812694471660Brachyspira intermedia PWS/A chromosome, complete genomeRpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma243e-1271.2
NC_016627:4323370:436892043689204369462543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1270.9
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1270.9
NC_008600:5113765:512978451297845130407624Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-1270.9
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1270.5
NC_011773:5144990:516152451615245162051528Bacillus cereus AH820 chromosome, complete genomeRNA polymerase sigma factor8e-1270.1
NC_005957:5091150:510720551072055107735531Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma-70 factor7e-1270.1
NC_013037:5395951:539916253991625399872711Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1269.7
NC_011772:5222917:524277052427705243297528Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-1168.9
NC_015436:440033:442515442515443042528Spirochaeta coccoides DSM 17374 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.9
NC_011898:426951:428407428407428976570Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1168.6
NC_020054:1335699:135291713529171353507591Fibrella aestuarina BUZ 2 drat genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.6
NC_014335:5038601:505489950548995055426528Bacillus cereus biovar anthracis str. CI chromosome, completeRNA polymerase sigma-70 factor2e-1168.6
NC_006274:5155395:517165151716515172184534Bacillus cereus E33L, complete genomeRNA polymerase sigma-70 factor2e-1168.6
NC_018750:3481476:348147634814763482261786Streptomyces venezuelae ATCC 10712, complete genomeputative RNA polymerase ECF-subfamily sigma factor3e-1168.2
NC_014655:424486:427004427004427549546Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily4e-1167.8
NC_011969:5063283:507947350794735080006534Bacillus cereus Q1 chromosome, complete genomeRNA polymerase sigma factor4e-1167.8
NC_013730:1572889:158410515841051584656552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1167.8
NC_010475:2188827:218983121898312190430600Synechococcus sp. PCC 7002, complete genometranscription initiation factor sigma E5e-1167.4
NC_015846:790374:805927805927806496570Capnocytophaga canimorsus Cc5 chromosome, complete genomesigma-W factor8e-1166.6
NC_015589:2019370:202926920292692029814546Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-1166.6
NC_013131:7530000:754581375458137546373561Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1066.2
NC_007907:2995889:301049930104993011068570Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1066.2
NC_016109:5290000:529044352904435291108666Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor1e-1066.2
NC_013037:2231006:224359722435972244193597Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.9
NC_004557:558500:573257573257573847591Clostridium tetani E88, complete genomeRNA polymerase sigma-70 factor2e-1065.9
NC_012581:5085915:510147551014755102002528Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA polymerase sigma factor1e-1065.9
NC_014393:4541000:454485545448554545400546Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1065.9
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor2e-1065.5
NC_013730:4399643:441409444140944414645552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.5
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor2e-1065.5
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family3e-1064.7
NC_015172:1120000:113691711369171137477561Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1064.7
NC_016620:24354:450414504145571531Bacteriovorax marinus SJ, complete genomeputative RNA polymerase ECF-type sigma factor4e-1064.7
NC_016111:581143:599375599375600094720Streptomyces cattleya NRRL 8057, complete genomeRNA polymerase ECF-subfamily sigma factor4e-1064.7
NC_017316:2581781:258269025826902583187498Enterococcus faecalis OG1RF chromosome, complete genomeRNA polymerase sigma-70 factor3e-1064.7
NC_009523:379705:396061396061396654594Roseiflexus sp. RS-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-1064.7
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C3e-1064.7
NC_017187:937649:950332950332950808477Arcobacter butzleri ED-1, complete genomeRNA polymerase sigma factor3e-1064.7
NC_013595:8553904:857219585721958572755561Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1064.7
NC_008700:2451798:247336124733612474008648Shewanella amazonensis SB2B, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1064.7
NC_009850:972692:985376985376985852477Arcobacter butzleri RM4018, complete genomesigma factor, ECF family4e-1064.3
NC_018679:2211000:223032922303292230931603Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeECF subfamily RNA polymerase sigma-24 factor4e-1064.3
NC_014328:3294086:329497232949723295487516Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma-E factor4e-1064.3
NC_016627:4323370:437774343777434378246504Clostridium clariflavum DSM 19732 chromosome, complete genomeRNA polymerase, sigma subunit, SigV4e-1064.3
NC_007760:645016:645016645016645522507Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma-24 (FecI-like)6e-1063.9
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor6e-1063.9
NC_009615:2709040:272511227251122725837726Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor8e-1063.5
NC_014148:3368519:337293333729333373580648Planctomyces limnophilus DSM 3776 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family8e-1063.5
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor7e-1063.5
NC_004668:3053119:305311930531193053616498Enterococcus faecalis V583, complete genomeRNA polymerase sigma-70 factor, ECF subfamily7e-1063.5
NC_002936:149100:163656163656164207552Dehalococcoides ethenogenes 195, complete genomeRNA polymerase sigma factor SigW, putative1e-0963.2
NC_008600:1042477:105546210554621055995534Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily9e-1063.2
NC_005957:1037205:104952510495251050058534Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma C factor9e-1063.2
NC_016779:991298:100202010020201002553534Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor9e-1063.2
NC_014828:541874:550982550982551533552Ethanoligenens harbinense YUAN-3 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1063.2
NC_007530:1007140:102029010202901020823534Bacillus anthracis str. 'Ames Ancestor', complete genomeRNA polymerase sigma C factor1e-0962.8
NC_003997:1007139:102029010202901020823534Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma C factor1e-0962.8
NC_012659:1008028:102019010201901020723534Bacillus anthracis str. A0248, complete genomeRNA polymerase factor sigma C1e-0962.8
NC_006274:1040836:105320610532061053739534Bacillus cereus E33L, complete genomeRNA polymerase sigma C factor1e-0962.8
NC_011886:1891077:190513119051311905970840Arthrobacter chlorophenolicus A6, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.8
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.8
NC_011772:1011220:102153510215351022068534Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0962.8
NC_010184:1017000:102909510290951029628534Bacillus weihenstephanensis KBAB4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.8
NC_013131:10413240:104313391043133910431857519Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_013891:353625:367815367815368318504Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeRNA polymerase ECF-type sigma factor2e-0962.4
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H2e-0962.4
NC_017208:1050414:106404110640411064574534Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase ECF-type sigma factor2e-0962.4
NC_014210:5752651:575645957564595757085627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_011773:1050000:106249510624951063028534Bacillus cereus AH820 chromosome, complete genomeRNA polymerase factor sigma C2e-0962.4
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-0962.4
NC_014931:1044313:106127810612781061889612Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.4
NC_005945:1008000:102009610200961020716621Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma C factor2e-0962
NC_014960:72737:752717527175828558Anaerolinea thermophila UNI-1, complete genomeRNA polymerase ECF-type sigma factor2e-0962
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0962
NC_014931:1642179:165110916511091651702594Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_014171:1018338:103091910309191031539621Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase ECF-type sigma factor3e-0961.6
NC_015703:5272193:529904352990435299582540Runella slithyformis DSM 19594 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0961.6
NC_009092:1684467:170170617017061702344639Shewanella loihica PV-4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0961.6
NC_008358:263458:267448267448268089642Hyphomonas neptunium ATCC 15444, complete genomeRNA polymerase sigma-70 factor, ECF family2e-0961.6
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor2e-0961.6
NC_016631:3114000:313063631306363131205570Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0961.2
NC_013730:6901725:691767169176716918270600Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_015172:850802:875550875550876032483Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_011830:1190502:120506412050641205564501Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_017200:1157835:117323311732331173853621Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RNA polymerase factor sigma C4e-0961.2
NC_015434:3581001:359056835905683591095528Verrucosispora maris AB-18-032 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily protein3e-0961.2
NC_014655:2782707:278688527868852787409525Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma subunit, ecf family5e-0960.8
NC_016830:2168523:218617921861792186661483Pseudomonas fluorescens F113 chromosome, complete genomeprotein FpvI5e-0960.8
NC_009664:4423829:461479646147964615419624Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0960.8
NC_011969:1084000:109474110947411095211471Bacillus cereus Q1 chromosome, complete genomeRNA polymerase factor sigma c4e-0960.8
NC_013205:1548500:1590030159003015916791650Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,RNA polymerase, sigma-24 subunit, ECF subfamily6e-0960.5
NC_007951:2206263:220626322062632207000738Burkholderia xenovorans LB400 chromosome 1, complete sequenceSigma-24 (FecI)6e-0960.5
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-0960.5
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0960.1
NC_013956:1762171:180161418016141802192579Pantoea ananatis LMG 20103 chromosome, complete genomeRpoE7e-0960.1
NC_014666:4547873:455674645567464557366621Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0960.1
NC_015589:1899329:190623419062341906758525Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0859.7
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-241e-0859.7
NC_009436:3367194:338976233897623390211450Enterobacter sp. 638, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0859.7
NC_004557:691944:708021708021708554534Clostridium tetani E88, complete genomeRNA polymerase sigma factor sigV9e-0959.7
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-0959.7
NC_016776:1470596:149332214933221493837516Bacteroides fragilis 638R, complete genomeputative RNA polymerase ECF-type sigma factor2e-0859.3
NC_006270:568171:592922592922593419498Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma-V)1e-0859.3
NC_006322:567987:592712592712593209498Bacillus licheniformis ATCC 14580, complete genomeSigV1e-0859.3
NC_013061:3390399:339834033983403398918579Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor1e-0859.3
NC_012483:3000619:301439730143973015074678Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor1e-0859.3
NC_014532:1307983:133179013317901332392603Halomonas elongata DSM 2581, complete genomeK03088 RNA polymerase sigma-70 factor, ECF subfamily1e-0859.3
NC_020133:3787844:380841538084153809068654Mycobacterium liflandii 128FXT, complete genomealternative RNA polymerase sigma factor1e-0859.3
NC_007333:3626510:363293636329363633556621Thermobifida fusca YX, complete genomeRNA polymerase sigma-70 factor1e-0859.3
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0859.3
NC_010723:1133163:113316311331631133726564Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma-70 factor, family1e-0859.3
NC_016109:62000:940019400194678678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0858.9
NC_016109:8664974:868860186886018689278678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0858.9
NC_016048:2907702:297798929779892978513525Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0858.9
NC_007761:781210:782989782989783618630Rhizobium etli CFN 42, complete genomeRNA polymerase sigma factor protein (sigma-24)2e-0858.9
NC_008312:577302:5975585975585986461089Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_008536:5192235:520295352029535203483531Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_015277:2283530:229844122984412299025585Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_014933:2240000:224013422401342240682549Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_020054:4028444:403406440340644034615552Fibrella aestuarina BUZ 2 drat genomeRNA polymerase sigma-E factor Sigma-242e-0858.5
NC_015957:527777:538567538567539109543Streptomyces violaceusniger Tu 4113 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0857.8
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE4e-0857.8
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE4e-0857.8
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor3e-0857.8
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor6e-0857.4
NC_014355:3669470:367093436709343671530597Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma factor SigK (Sigma-K)6e-0857.4
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857.4
NC_014305:97055:100558100558101007450Erwinia billingiae Eb661 plasmid pEB170, complete sequenceECF subfamily RNA polymerase sigma-70 factor6e-0857.4
NC_004663:5194400:520235452023545202908555Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor7e-0857
NC_002696:2941644:296405329640532964613561Caulobacter crescentus CB15, complete genomeRNA polymerase sigma-70 factor7e-0857
NC_011916:2967624:299003329900332990593561Caulobacter crescentus NA1000 chromosome, complete genomeRNA polymerase sigma factor7e-0857
NC_019960:1272956:131266813126681313201534Prevotella dentalis DSM 3688 chromosome 1, complete sequenceRNA polymerase sigma-70 factor, bacteroides expansion family 16e-0857
NC_021184:3174500:318582031858203186374555Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family6e-0857
NC_015160:3749636:375426437542643754857594Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0856.6
NC_017273:352150:380081380081380596516Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeECF subfamily RNA polymerase sigma-24 subunit9e-0856.6
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0856.6
NC_016609:4152977:416982841698284170394567Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit8e-0856.6
NC_010552:58294:958139581396517705Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily8e-0856.6
NC_010002:4572573:461546046154604616068609Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_007907:2306561:230812823081282308652525Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0756.2
NC_016582:5769080:579130957913095791824516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative sigma factor1e-0756.2
NC_021184:3174500:318039731803973180936540Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0756.2
NC_014100:2782000:280274428027442803247504Caulobacter segnis ATCC 21756 chromosome, complete genomeRNA polymerase sigma-24 factor1e-0756.2
NC_013929:1119384:113906711390671139573507Streptomyces scabiei 87.22 chromosome, complete genomesigma factor1e-0756.2
NC_008391:2045348:206876820687682069472705Burkholderia cepacia AMMD chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_015160:1786350:180726218072621807885624Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_010002:4175809:418865341886534189231579Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_011901:491783:492538492538493095558Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit1e-0755.8
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_004547:2285092:229013322901332290600468Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative RNA polymerase sigma factor2e-0755.5
NC_015434:4640769:466706546670654667562498Verrucosispora maris AB-18-032 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily protein2e-0755.5
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_016048:2678205:270587327058732706352480Oscillibacter valericigenes Sjm18-20, complete genomeRNA polymerase ECF subfamily sigma factor3e-0755.1
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily2e-0755.1
NC_012846:1888000:190443319044331904987555Bartonella grahamii as4aup, complete genomeRNA polymerase sigma factor2e-0755.1
NC_015953:3159234:316146431614643162048585Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0754.7
NC_015275:521436:543158543158543628471Clostridium lentocellum DSM 5427 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.7
NC_010572:3925803:395301139530113953586576Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase ECF-subfamily sigma factor3e-0754.7
NC_016514:3573400:360540636054063605996591Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma-E factor4e-0754.3
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C4e-0754.3
NC_014933:602312:614199614199614702504Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma subunit, ECF family5e-0754.3
NC_015673:464630:467907467907468443537Corynebacterium resistens DSM 45100 chromosome, complete genomeECF-family sigma factor W6e-0753.9
NC_016111:3052494:309113230911323091815684Streptomyces cattleya NRRL 8057, complete genomeRNA polymerase ECF-subfamily sigma factor6e-0753.9
NC_015966:1145974:116775911677591168322564Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-0753.9
NC_014910:2779573:279193627919362792454519Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family5e-0753.9
NC_012778:2049694:206882820688282069400573Eubacterium eligens ATCC 27750, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-0753.9
NC_017186:3947874:396965139696513970265615Amycolatopsis mediterranei S699 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor7e-0753.5
NC_014318:3947845:396962239696223970236615Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily7e-0753.5
NC_014614:2500301:250120025012002501682483Clostridium sticklandii, complete genomeSigV7e-0753.5
NC_014830:4012999:100361003610545510Intrasporangium calvum DSM 43043 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.5
NC_013037:2851940:285194028519402852518579Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0753.1
NC_014500:2479814:249455224945522495001450Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-54 factor rpoN9e-0753.1
NC_005956:1572500:159013115901311590685555Bartonella henselae str. Houston-1, complete genomeRNA polymerase sigma-70 factor9e-0753.1
NC_013169:513327:539599539599540546948Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma-70 factor, TIGR02960 family1e-0652.8
NC_012491:1187864:119296911929691193538570Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor1e-0652.8
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652.8
NC_010172:480000:497599497599498279681Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0652.8
NC_004193:2342528:236319123631912363658468Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor2e-0652.4
NC_017080:1194199:119784911978491198454606Phycisphaera mikurensis NBRC 102666, complete genomeRNA polymerase ECF-type sigma factor2e-0652.4
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily2e-0652
NC_020300:1344453:136080613608061361360555Bartonella australis Aust/NH1, complete genomeRNA polymerase sigma factor2e-0652
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor2e-0652
NC_009614:1071548:108075110807511081263513Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase ECF-type sigma factor3e-0651.6
NC_017079:2634623:264607226460722646950879Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative RNA polymerase ECF-type sigma factor3e-0651.6
NC_010161:2050816:207017720701772070731555Bartonella tribocorum CIP 105476, complete genomeRNA polymerase sigma factor3e-0651.6
NC_015953:3782302:380522238052223805776555Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_012811:139498:143577143577144257681Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_011757:1067543:107244910724491073129681Methylobacterium chloromethanicum CM4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_010678:642769:664204664204664836633Ralstonia pickettii 12J chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_012880:3982383:400842040084204008974555Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0651.6
NC_008319:1376938:137642913764291376980552Synechococcus sp. CC9311, complete genomeRNA polymerase sigma-70 factor family protein2e-0651.6
NC_016932:175872:183028183028183591564Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor4e-0651.2
NC_010337:2793667:280469028046902805241552Heliobacterium modesticaldum Ice1, complete genomeRNA polymerase sigma factor4e-0651.2
NC_019896:1483073:148418814841881484718531Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigZ5e-0650.8
NC_017093:3777178:379561837956183796130513Actinoplanes missouriensis 431, complete genomeputative RNA polymerase ECF-subfamily sigma factor5e-0650.8
NC_016109:4088259:408825940882594088831573Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-0650.8
NC_015177:2642368:266242426624242662972549Pedobacter saltans DSM 12145 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0650.8
NC_004663:4373902:437668943766894377198510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor7e-0650.4
NC_014650:1942935:196065919606591961171513Geobacillus sp. Y4.1MC1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit7e-0650.4
NC_015683:241377:246024246024246587564Corynebacterium ulcerans BR-AD22 chromosome, complete genomeECF family sigma factor C6e-0650.4
NC_017317:246155:250784250784251347564Corynebacterium ulcerans 809 chromosome, complete genomeECF-family sigma factor C6e-0650.4
NC_015277:5211779:522919252291925229782591Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.4
NC_015160:2239933:226227222622722262844573Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0650.1
NC_016609:6136411:615649361564936157086594Niastella koreensis GR20-10 chromosome, complete genomeRNA polymerase, sigma subunit, SigX8e-0650.1
NC_012560:2315350:232811423281142328680567Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma-70 factor1e-0549.7
NC_021150:2315362:232812623281262328692567Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor SigX1e-0549.7