Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:2188827 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21888272189267441hypothetical protein
21894122189834423hypothetical protein
21898312190430600transcription initiation factor sigma EQuickGO ontologyBLASTP
2190578219064972tRNA-AsnQuickGO ontology
219084521932382394Transglutaminase-like superfamily domain proteinQuickGO ontologyBLASTP
2193241219332787tRNA-SerQuickGO ontology
219362421956992076two-component response regulatorQuickGO ontologyBLASTP
219619521989722778hypothetical proteinBLASTP
219905822001551098hypothetical protein
220061822029842367cellulose synthase catalytic subunitQuickGO ontologyBLASTP
22030372203369333STAS domain proteinQuickGO ontologyBLASTP
220390422050761173type II NADH dehydrogenase BQuickGO ontologyBLASTP
22050912205768678putative haloacid dehalogenase-like hydrolaseQuickGO ontologyBLASTP
220596422072921329transposaseQuickGO ontologyBLASTP
22073312208188858urease accessory protein UreDQuickGO ontologyBLASTP
22081912208376186hypothetical protein
220845622099281473glycogen synthase 2 Starch bacterialglycogen synthase 2QuickGO ontologyBLASTP
22100802210361282hypothetical protein
221047322118191347acetyl-CoA carboxylase biotin carboxylaseQuickGO ontologyBLASTP
22118852212499615hypothetical protein
22126262212913288putative YGGT family proteinQuickGO ontologyBLASTP
22130522213489438hypothetical proteinBLASTP
221356622148611296homoserine dehydrogenaseQuickGO ontologyBLASTP