Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:426951 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4269514283031353beta-galactosidaseQuickGO ontologyBLASTP
428407428976570RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
428979429377399hypothetical protein
429400430101702hypothetical protein
430068430457390hypothetical proteinBLASTP
4307684329662199protein of unknown function DUF291QuickGO ontologyBLASTP
4331474344061260histidyl-tRNA synthetase 2QuickGO ontologyBLASTP
434437435081645ATP phosphoribosyltransferaseQuickGO ontologyBLASTP
4350864363901305histidinol dehydrogenaseQuickGO ontologyBLASTP
4364334375091077histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
437571438155585imidazoleglycerol-phosphate dehydrataseQuickGO ontologyBLASTP
438189439085897phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
439082439696615imidazole glycerol phosphate synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
439708440418711phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP
440468441229762imidazoleglycerol phosphate synthase cyclase subunitQuickGO ontologyBLASTP
441310441945636phosphoribosyl-ATP diphosphataseQuickGO ontologyBLASTP
4419464433671422hypothetical proteinBLASTP
443580443864285chaperonin Cpn10QuickGO ontologyBLASTP
4438884455191632chaperonin GroELQuickGO ontologyBLASTP
445690446193504hypothetical proteinBLASTP
4463094478111503IMP dehydrogenaseGMP reductaseQuickGO ontologyBLASTP
448093448569477transcription elongation factor GreAQuickGO ontologyBLASTP
4486984501971500lysyl-tRNA synthetaseQuickGO ontologyBLASTP
450291451202912hypothetical protein
451241451558318anti-sigma-factor antagonistQuickGO ontologyBLASTP
451644452030387putative anti-sigma regulatory factor serinethreonine protein kinaseQuickGO ontologyBLASTP
452033452782750RNA polymerase sigma 28 subunit Sig BFG subfamilyQuickGO ontologyBLASTP
452853453287435putative anti-sigma regulatory factor serinethreonine protein kinaseQuickGO ontologyBLASTP
453791455431164116S ribosomal RNAQuickGO ontologyBLASTP
45560945568476tRNA-AlaQuickGO ontologyBLASTP
456205459117291323S ribosomal RNAQuickGO ontologyBLASTP
4593694594841165S ribosomal RNAQuickGO ontologyBLASTP
45949045956576tRNA-AsnQuickGO ontology
4601754612931119hypothetical protein
461451461642192BLASTP
462382462588207hypothetical protein
4627794639281150transposase IS3IS911 family proteinQuickGO ontologyBLASTP
463988464308321hypothetical protein
464657465013357hypothetical protein
465221466162942hypothetical proteinBLASTP