Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:527777 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5263995277961398FAD-dependent pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
527777528013237FAD-dependent pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
528206528961756short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
5291605304971338hypothetical protein
530487530843357membrane protein ynfAQuickGO ontologyBLASTP
530959531471513hypothetical proteinBLASTP
531547531981435hypothetical protein
5322525340391788Resolvase domain-containing proteinQuickGO ontologyBLASTP
534645534821177hypothetical protein
534873535841969XRE family transcriptional regulatorQuickGO ontologyBLASTP
5361565374271272transposase mutator typeQuickGO ontologyBLASTP
537570537752183hypothetical protein
537749538003255hypothetical protein
538235538381147hypothetical protein
538567539109543ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
539106539948843hypothetical protein
5406425419581317glutamate-1-semialdehyde 21-aminomutaseQuickGO ontologyBLASTP
541955542653699phosphoglycerate mutaseQuickGO ontologyBLASTP
5429205441041185hypothetical proteinBLASTP
544211544828618Redoxin domain-containing proteinQuickGO ontologyBLASTP
544834545598765cytochrome c biogenesis transmembrane proteinQuickGO ontologyBLASTP