Pre_GI Gene

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Host: NC_004663 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004663:5194400 Bacteroides thetaiotaomicron VPI-5482, complete genome

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
519440051957341335putative peptidoglycan bound proteinQuickGO ontology
51960045196438435hypothetical proteinBLASTP
519663351989002268putative alpha-12-mannosidaseQuickGO ontologyBLASTP
519899852012742277putative alpha-12-mannosidaseQuickGO ontologyBLASTP
52013065202235930putative anti-sigma factorQuickGO ontologyBLASTP
52023545202908555RNA polymerase ECF-type sigma factorQuickGO ontologyBLASTP
520293652051672232putative alpha-12-mannosidaseQuickGO ontologyBLASTP
520540052080182619alanyl-tRNA synthetaseQuickGO ontologyBLASTP
52081265209094969putative peptidaseQuickGO ontologyBLASTP
52091165209457342transcriptional regulatorQuickGO ontologyBLASTP
520945952117022244GTP pyrophosphokinaseQuickGO ontologyBLASTP
521177552130701296membrane-bound lytic murein transglycosylase D presursorQuickGO ontologyBLASTP