Pre_GI Gene

Some Help

Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:3409199 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
340919934099217231-acyl-sn-glycerol-3-phosphate acyltransferaseQuickGO ontologyBLASTP
34102073411133927putative hydrolase metallo-beta-lactamase superfamilyQuickGO ontologyBLASTP
341129334125131221transposaseQuickGO ontologyBLASTP
34127433413219477hypothetical proteinBLASTP
34132193413551333hypothetical protein
34135273414072546RNA polymerase sigma factor sigma-70 familyQuickGO ontologyBLASTP
341407934151371059hypothetical protein
3415434341550875tRNA-AsnQuickGO ontology
341551834156341175S ribosomal RNAQuickGO ontologyBLASTP
34211603421606447hypothetical proteinBLASTP
34217253422561837undecaprenyl-diphosphatase UppPQuickGO ontologyBLASTP
34226373423614978phosphomannose isomeraseQuickGO ontologyBLASTP
342406634254301365UDP-N-acetylmuramyl tripeptide synthaseQuickGO ontologyBLASTP
34254893426226738putative glutamine amidotransferaseQuickGO ontologyBLASTP
342636734289702604ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
342919434304531260hypothetical proteinBLASTP
343047734317781302putative transcriptional regulator with C-terminal CBS domainsQuickGO ontologyBLASTP