Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:3000619 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30006193001320702peptidase M50B familyQuickGO ontologyBLASTP
30013703001738369cupin domain proteinQuickGO ontologyBLASTP
30017353002343609hypothetical proteinBLASTP
30027553003501747hypothetical proteinBLASTP
300378930048501062anthranilate phosphoribosyltransferaseQuickGO ontologyBLASTP
300574630086642919peptidase S53 familyQuickGO ontologyBLASTP
300883630106741839hypothetical proteinBLASTP
301069230124431752transporter outer bacterial membrane secretin Secretin familyQuickGO ontologyBLASTP
30127743013724951hypothetical protein
30143973015074678RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
30154933015837345hypothetical protein
30189723019754783ISAca2 transposase istBQuickGO ontologyBLASTP
30211723022041870group II intron-encoded maturase truncatedQuickGO ontologyBLASTP
3022045302211975Group II catalytic intronQuickGO ontology
30222673023196930IS3 family transposase orfBQuickGO ontologyBLASTP
30231903023456267IS3 family transposase orfAQuickGO ontologyBLASTP
30235403023911372hypothetical proteinBLASTP
302452630257011176succinyl-CoA synthase beta subunitQuickGO ontologyBLASTP