Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:165559 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1655591737608202putative adhesinQuickGO ontologyBLASTP
174227174916690putative transposaseQuickGO ontologyBLASTP
175182176000819hypothetical proteinBLASTP
176426176824399hypothetical protein
176824176958135hypothetical protein
176984177433450hypothetical protein
177524178027504hypothetical protein
178328178855528putative signal peptidaseQuickGO ontologyBLASTP
178852179268417hypothetical protein
179301179774474hypothetical protein
179782180072291hypothetical protein
180103180216114hypothetical protein
180318180905588hypothetical proteinBLASTP
180922181533612hypothetical protein
181805182386582putative lipoproteinQuickGO ontologyBLASTP
182426183106681putative lipoproteinQuickGO ontologyBLASTP
183136183498363putative lipoproteinQuickGO ontologyBLASTP
183495184145651putative lipoproteinQuickGO ontologyBLASTP
1842341858891656hypothetical proteinBLASTP
186028186600573RNA polymerase sigma factorQuickGO ontologyBLASTP
186597187190594hypothetical proteinBLASTP
1891781904041227hypothetical proteinBLASTP
1904011922331833hypothetical proteinBLASTP
1928671950412175hypothetical proteinBLASTP
195684196526843hypothetical proteinBLASTP
1966251995132889hypothetical proteinBLASTP
199510199782273hypothetical proteinBLASTP
199779200063285hypothetical proteinBLASTP
200060200545486hypothetical proteinBLASTP